Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC6A12P48065 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 AL109954.1-202ENST00000564051 2148 ntBASIC15.31■□□□□ 0.04
SLC6A12P48065 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.3■□□□□ 0.04
SLC6A12P48065 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SLC6A12P48065 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC6A12P48065 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SLC6A12P48065 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC6A12P48065 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC6A12P48065 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SLC6A12P48065 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC6A12P48065 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC6A12P48065 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC6A12P48065 SERBP1P3-201ENST00000459980 809 ntBASIC15.3■□□□□ 0.04
SLC6A12P48065 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC6A12P48065 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SLC6A12P48065 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC6A12P48065 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.3■□□□□ 0.04
SLC6A12P48065 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC6A12P48065 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SLC6A12P48065 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.3■□□□□ 0.04
SLC6A12P48065 Z97205.2-201ENST00000564697 1639 ntBASIC15.3■□□□□ 0.04
SLC6A12P48065 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.3■□□□□ 0.04
SLC6A12P48065 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SLC6A12P48065 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC6A12P48065 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 TEX28P1-201ENST00000613479 1221 ntBASIC15.3■□□□□ 0.04
SLC6A12P48065 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SLC6A12P48065 TEX28P2-201ENST00000617764 1221 ntBASIC15.3■□□□□ 0.04
SLC6A12P48065 MIR6069-201ENST00000620069 79 ntBASIC15.3■□□□□ 0.04
SLC6A12P48065 AC139530.3-201ENST00000620344 690 ntBASIC15.3■□□□□ 0.04
SLC6A12P48065 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC6A12P48065 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SLC6A12P48065 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC6A12P48065 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC6A12P48065 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC6A12P48065 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC6A12P48065 AC006486.2-201ENST00000624246 2199 ntBASIC15.29■□□□□ 0.04
SLC6A12P48065 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC6A12P48065 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC6A12P48065 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC6A12P48065 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC6A12P48065 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
SLC6A12P48065 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC6A12P48065 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SLC6A12P48065 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SLC6A12P48065 KLF2P3-201ENST00000451977 1087 ntBASIC15.29■□□□□ 0.04
SLC6A12P48065 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC6A12P48065 AC125807.1-201ENST00000483097 614 ntBASIC15.29■□□□□ 0.04
SLC6A12P48065 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC6A12P48065 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC6A12P48065 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC6A12P48065 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC6A12P48065 AC004449.1-201ENST00000564240 433 ntBASIC15.29■□□□□ 0.04
SLC6A12P48065 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC6A12P48065 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 AC025048.3-201ENST00000590609 569 ntBASIC15.29■□□□□ 0.04
SLC6A12P48065 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC6A12P48065 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC6A12P48065 AC005702.4-201ENST00000618393 416 ntBASIC15.29■□□□□ 0.04
SLC6A12P48065 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC6A12P48065 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms