Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.91■□□□□ 0.14
XRCC1P18887 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.91■□□□□ 0.14
XRCC1P18887 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
XRCC1P18887 REXO1L8P-201ENST00000604378 1897 ntBASIC15.91■□□□□ 0.14
XRCC1P18887 FO538757.1-201ENST00000623083 1397 ntBASIC15.91■□□□□ 0.14
XRCC1P18887 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
XRCC1P18887 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
XRCC1P18887 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
XRCC1P18887 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
XRCC1P18887 AL353705.2-201ENST00000428243 662 ntBASIC15.91■□□□□ 0.14
XRCC1P18887 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.91■□□□□ 0.14
XRCC1P18887 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.91■□□□□ 0.14
XRCC1P18887 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.91■□□□□ 0.14
XRCC1P18887 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.91■□□□□ 0.14
XRCC1P18887 AC097493.3-201ENST00000509725 367 ntBASIC15.91■□□□□ 0.14
XRCC1P18887 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.91■□□□□ 0.14
XRCC1P18887 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.91■□□□□ 0.14
XRCC1P18887 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.91■□□□□ 0.14
XRCC1P18887 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.91■□□□□ 0.14
XRCC1P18887 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.91■□□□□ 0.14
XRCC1P18887 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.91■□□□□ 0.14
XRCC1P18887 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.91■□□□□ 0.14
XRCC1P18887 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
XRCC1P18887 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.91■□□□□ 0.14
XRCC1P18887 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.91■□□□□ 0.14
XRCC1P18887 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.91■□□□□ 0.14
XRCC1P18887 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
XRCC1P18887 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
XRCC1P18887 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
XRCC1P18887 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
XRCC1P18887 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.91■□□□□ 0.14
XRCC1P18887 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.91■□□□□ 0.14
XRCC1P18887 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
XRCC1P18887 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.91■□□□□ 0.14
XRCC1P18887 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
XRCC1P18887 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
XRCC1P18887 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.91■□□□□ 0.14
XRCC1P18887 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
XRCC1P18887 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.9■□□□□ 0.14
XRCC1P18887 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
XRCC1P18887 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.9■□□□□ 0.14
XRCC1P18887 TREML5P-201ENST00000421694 576 ntBASIC15.9■□□□□ 0.14
XRCC1P18887 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 BASP1P1-201ENST00000430708 665 ntBASIC15.9■□□□□ 0.14
XRCC1P18887 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 AC093214.1-201ENST00000511688 1107 ntBASIC15.9■□□□□ 0.14
XRCC1P18887 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.9■□□□□ 0.14
XRCC1P18887 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.9■□□□□ 0.14
XRCC1P18887 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.9■□□□□ 0.14
XRCC1P18887 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.9■□□□□ 0.14
XRCC1P18887 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.9■□□□□ 0.14
XRCC1P18887 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.9■□□□□ 0.14
XRCC1P18887 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
XRCC1P18887 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC1P18887 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
XRCC1P18887 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.89■□□□□ 0.13
XRCC1P18887 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
XRCC1P18887 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
XRCC1P18887 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.89■□□□□ 0.13
XRCC1P18887 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.89■□□□□ 0.13
XRCC1P18887 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.89■□□□□ 0.13
XRCC1P18887 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
XRCC1P18887 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.89■□□□□ 0.13
XRCC1P18887 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.89■□□□□ 0.13
XRCC1P18887 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.89■□□□□ 0.13
XRCC1P18887 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.89■□□□□ 0.13
XRCC1P18887 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.89■□□□□ 0.13
XRCC1P18887 BCRP1-201ENST00000444246 691 ntBASIC15.89■□□□□ 0.13
XRCC1P18887 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.89■□□□□ 0.13
XRCC1P18887 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.89■□□□□ 0.13
XRCC1P18887 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
XRCC1P18887 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.89■□□□□ 0.13
XRCC1P18887 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.89■□□□□ 0.13
XRCC1P18887 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.89■□□□□ 0.13
XRCC1P18887 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms