Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRAFP15056 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
BRAFP15056 AC126755.1-201ENST00000525846 6405 ntBASIC16.43■□□□□ 0.22
BRAFP15056 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRAFP15056 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRAFP15056 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRAFP15056 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BRAFP15056 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.42■□□□□ 0.22
BRAFP15056 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.42■□□□□ 0.22
BRAFP15056 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.42■□□□□ 0.22
BRAFP15056 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
BRAFP15056 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.42■□□□□ 0.22
BRAFP15056 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.42■□□□□ 0.22
BRAFP15056 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
BRAFP15056 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
BRAFP15056 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.42■□□□□ 0.22
BRAFP15056 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.42■□□□□ 0.22
BRAFP15056 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
BRAFP15056 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.42■□□□□ 0.22
BRAFP15056 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.42■□□□□ 0.22
BRAFP15056 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.42■□□□□ 0.22
BRAFP15056 AC087641.1-201ENST00000557561 1021 ntBASIC16.42■□□□□ 0.22
BRAFP15056 AP001350.2-201ENST00000625104 1094 ntBASIC16.42■□□□□ 0.22
BRAFP15056 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.42■□□□□ 0.22
BRAFP15056 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
BRAFP15056 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
BRAFP15056 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.42■□□□□ 0.22
BRAFP15056 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
BRAFP15056 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.42■□□□□ 0.22
BRAFP15056 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.42■□□□□ 0.22
BRAFP15056 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
BRAFP15056 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.42■□□□□ 0.22
BRAFP15056 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
BRAFP15056 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRAFP15056 AC106881.1-201ENST00000605849 3329 ntBASIC16.42■□□□□ 0.22
BRAFP15056 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.42■□□□□ 0.22
BRAFP15056 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.42■□□□□ 0.22
BRAFP15056 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
BRAFP15056 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
BRAFP15056 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.41■□□□□ 0.22
BRAFP15056 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRAFP15056 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRAFP15056 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRAFP15056 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRAFP15056 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
BRAFP15056 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRAFP15056 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.41■□□□□ 0.22
BRAFP15056 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRAFP15056 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRAFP15056 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.41■□□□□ 0.22
BRAFP15056 RPS8P6-201ENST00000426177 609 ntBASIC16.41■□□□□ 0.22
BRAFP15056 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRAFP15056 AP006288.1-201ENST00000446065 395 ntBASIC16.41■□□□□ 0.22
BRAFP15056 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.41■□□□□ 0.22
BRAFP15056 CEND1P1-201ENST00000451006 455 ntBASIC16.41■□□□□ 0.22
BRAFP15056 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.41■□□□□ 0.22
BRAFP15056 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.41■□□□□ 0.22
BRAFP15056 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.41■□□□□ 0.22
BRAFP15056 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.41■□□□□ 0.22
BRAFP15056 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.41■□□□□ 0.22
BRAFP15056 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.41■□□□□ 0.22
BRAFP15056 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.41■□□□□ 0.22
BRAFP15056 AC099522.2-201ENST00000607001 744 ntBASIC16.41■□□□□ 0.22
BRAFP15056 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.41■□□□□ 0.22
BRAFP15056 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
BRAFP15056 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
BRAFP15056 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRAFP15056 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRAFP15056 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
BRAFP15056 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRAFP15056 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRAFP15056 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.41■□□□□ 0.22
BRAFP15056 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRAFP15056 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
BRAFP15056 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.41■□□□□ 0.22
BRAFP15056 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.41■□□□□ 0.22
BRAFP15056 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.41■□□□□ 0.22
BRAFP15056 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRAFP15056 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms