Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 HMGA1P7-201ENST00000406908 502 ntBASIC13.02□□□□□ -0.33
DEFA4P12838 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
DEFA4P12838 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.02□□□□□ -0.33
DEFA4P12838 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.02□□□□□ -0.33
DEFA4P12838 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
DEFA4P12838 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.02□□□□□ -0.33
DEFA4P12838 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
DEFA4P12838 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
DEFA4P12838 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.02□□□□□ -0.33
DEFA4P12838 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.02□□□□□ -0.33
DEFA4P12838 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
DEFA4P12838 AC096734.2-201ENST00000562054 433 ntBASIC13.02□□□□□ -0.33
DEFA4P12838 SLC25A6P4-201ENST00000586535 553 ntBASIC13.02□□□□□ -0.33
DEFA4P12838 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
DEFA4P12838 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.02□□□□□ -0.33
DEFA4P12838 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
DEFA4P12838 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.02□□□□□ -0.33
DEFA4P12838 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
DEFA4P12838 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.02□□□□□ -0.33
DEFA4P12838 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
DEFA4P12838 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.02□□□□□ -0.33
DEFA4P12838 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.02□□□□□ -0.33
DEFA4P12838 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
DEFA4P12838 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
DEFA4P12838 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
DEFA4P12838 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
DEFA4P12838 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
DEFA4P12838 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
DEFA4P12838 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.02□□□□□ -0.33
DEFA4P12838 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
DEFA4P12838 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.02□□□□□ -0.33
DEFA4P12838 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.02□□□□□ -0.33
DEFA4P12838 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
DEFA4P12838 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
DEFA4P12838 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.01□□□□□ -0.33
DEFA4P12838 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
DEFA4P12838 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.01□□□□□ -0.33
DEFA4P12838 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
DEFA4P12838 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.01□□□□□ -0.33
DEFA4P12838 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.01□□□□□ -0.33
DEFA4P12838 AC009078.2-202ENST00000463353 338 ntBASIC13.01□□□□□ -0.33
DEFA4P12838 IGHV3-22-201ENST00000520721 359 ntBASIC13.01□□□□□ -0.33
DEFA4P12838 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.01□□□□□ -0.33
DEFA4P12838 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
DEFA4P12838 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.01□□□□□ -0.33
DEFA4P12838 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.01□□□□□ -0.33
DEFA4P12838 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.01□□□□□ -0.33
DEFA4P12838 MIR3909-201ENST00000579518 119 ntBASIC13.01□□□□□ -0.33
DEFA4P12838 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.01□□□□□ -0.33
DEFA4P12838 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.01□□□□□ -0.33
DEFA4P12838 HLA-A-201ENST00000376802 1334 ntBASIC13.01□□□□□ -0.33
DEFA4P12838 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.01□□□□□ -0.33
DEFA4P12838 AC104109.2-201ENST00000602919 1418 ntBASIC13.01□□□□□ -0.33
DEFA4P12838 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
DEFA4P12838 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.01□□□□□ -0.33
DEFA4P12838 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
DEFA4P12838 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 AC005622.1-201ENST00000636801 1703 ntBASIC13.01□□□□□ -0.33
DEFA4P12838 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.01□□□□□ -0.33
DEFA4P12838 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.01□□□□□ -0.33
DEFA4P12838 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 U82695.1-201ENST00000635752 1889 ntBASIC13.01□□□□□ -0.33
DEFA4P12838 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
DEFA4P12838 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.01□□□□□ -0.33
DEFA4P12838 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 AL009178.2-201ENST00000597278 2719 ntBASIC13.01□□□□□ -0.33
DEFA4P12838 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.01□□□□□ -0.33
DEFA4P12838 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DEFA4P12838 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
DEFA4P12838 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13□□□□□ -0.33
DEFA4P12838 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
DEFA4P12838 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13□□□□□ -0.33
DEFA4P12838 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13□□□□□ -0.33
DEFA4P12838 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
DEFA4P12838 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13□□□□□ -0.33
DEFA4P12838 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
DEFA4P12838 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
DEFA4P12838 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
DEFA4P12838 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13□□□□□ -0.33
DEFA4P12838 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DEFA4P12838 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
DEFA4P12838 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms