Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 AC004890.2-204ENST00000481968 304 ntBASIC15.09■□□□□ 0.01
ZNF888P0CJ79 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 AC044860.1-202ENST00000559481 777 ntBASIC15.09■□□□□ 0.01
ZNF888P0CJ79 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 AC025048.3-201ENST00000590609 569 ntBASIC15.09■□□□□ 0.01
ZNF888P0CJ79 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 AC005702.4-201ENST00000618393 416 ntBASIC15.09■□□□□ 0.01
ZNF888P0CJ79 AL109936.8-201ENST00000641772 604 ntBASIC15.09■□□□□ 0.01
ZNF888P0CJ79 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 AC132872.4-202ENST00000622924 2756 ntBASIC15.09■□□□□ 0.01
ZNF888P0CJ79 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF888P0CJ79 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF888P0CJ79 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF888P0CJ79 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.08■□□□□ 0.01
ZNF888P0CJ79 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF888P0CJ79 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF888P0CJ79 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF888P0CJ79 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
ZNF888P0CJ79 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF888P0CJ79 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF888P0CJ79 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.08■□□□□ 0
ZNF888P0CJ79 AL607033.1-201ENST00000623900 1599 ntBASIC15.08■□□□□ 0
ZNF888P0CJ79 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.08■□□□□ 0
ZNF888P0CJ79 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.08■□□□□ 0
ZNF888P0CJ79 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.08■□□□□ 0
ZNF888P0CJ79 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.08■□□□□ 0
ZNF888P0CJ79 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.08■□□□□ 0
ZNF888P0CJ79 TARDBPP1-201ENST00000442013 1203 ntBASIC15.08■□□□□ 0
ZNF888P0CJ79 AC009477.1-201ENST00000452936 217 ntBASIC15.08■□□□□ 0
ZNF888P0CJ79 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.08■□□□□ 0
ZNF888P0CJ79 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.08■□□□□ 0
ZNF888P0CJ79 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZNF888P0CJ79 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.08■□□□□ 0
ZNF888P0CJ79 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.08■□□□□ 0
ZNF888P0CJ79 RNA5SP421-201ENST00000516864 134 ntBASIC15.08■□□□□ 0
ZNF888P0CJ79 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.08■□□□□ 0
ZNF888P0CJ79 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.08■□□□□ 0
ZNF888P0CJ79 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.08■□□□□ 0
ZNF888P0CJ79 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.08■□□□□ 0
ZNF888P0CJ79 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.08■□□□□ 0
ZNF888P0CJ79 AC097359.3-201ENST00000603982 1210 ntBASIC15.08■□□□□ 0
ZNF888P0CJ79 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF888P0CJ79 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
ZNF888P0CJ79 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.08■□□□□ 0
ZNF888P0CJ79 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZNF888P0CJ79 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF888P0CJ79 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF888P0CJ79 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.08■□□□□ 0
ZNF888P0CJ79 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
ZNF888P0CJ79 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.08■□□□□ 0
ZNF888P0CJ79 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF888P0CJ79 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF888P0CJ79 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.08■□□□□ 0
ZNF888P0CJ79 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.08■□□□□ 0
ZNF888P0CJ79 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF888P0CJ79 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.08■□□□□ 0
ZNF888P0CJ79 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF888P0CJ79 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.07■□□□□ 0
ZNF888P0CJ79 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.07■□□□□ 0
ZNF888P0CJ79 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
ZNF888P0CJ79 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms