Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
UBCP0CG48 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.02□□□□□ -0.17
UBCP0CG48 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBCP0CG48 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
UBCP0CG48 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
UBCP0CG48 AL109954.1-202ENST00000564051 2148 ntBASIC14.02□□□□□ -0.17
UBCP0CG48 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.02□□□□□ -0.17
UBCP0CG48 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBCP0CG48 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.01□□□□□ -0.17
UBCP0CG48 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
UBCP0CG48 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.01□□□□□ -0.17
UBCP0CG48 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.01□□□□□ -0.17
UBCP0CG48 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.01□□□□□ -0.17
UBCP0CG48 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.01□□□□□ -0.17
UBCP0CG48 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
UBCP0CG48 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
UBCP0CG48 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.01□□□□□ -0.17
UBCP0CG48 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.01□□□□□ -0.17
UBCP0CG48 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.01□□□□□ -0.17
UBCP0CG48 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.01□□□□□ -0.17
UBCP0CG48 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 AC024267.1-201ENST00000582320 895 ntBASIC14.01□□□□□ -0.17
UBCP0CG48 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
UBCP0CG48 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.01□□□□□ -0.17
UBCP0CG48 AC104692.2-201ENST00000603054 253 ntBASIC14.01□□□□□ -0.17
UBCP0CG48 AC068137.2-201ENST00000605408 478 ntBASIC14.01□□□□□ -0.17
UBCP0CG48 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 AC004877.2-201ENST00000623941 599 ntBASIC14.01□□□□□ -0.17
UBCP0CG48 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.01□□□□□ -0.17
UBCP0CG48 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.01□□□□□ -0.17
UBCP0CG48 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
UBCP0CG48 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.01□□□□□ -0.17
UBCP0CG48 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBCP0CG48 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14□□□□□ -0.17
UBCP0CG48 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14□□□□□ -0.17
UBCP0CG48 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14□□□□□ -0.17
UBCP0CG48 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
UBCP0CG48 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14□□□□□ -0.17
UBCP0CG48 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
UBCP0CG48 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14□□□□□ -0.17
UBCP0CG48 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
UBCP0CG48 AC002056.1-201ENST00000395613 760 ntBASIC14□□□□□ -0.17
UBCP0CG48 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14□□□□□ -0.17
UBCP0CG48 AL450487.1-201ENST00000426799 995 ntBASIC14□□□□□ -0.17
UBCP0CG48 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14□□□□□ -0.17
UBCP0CG48 KRT19P2-202ENST00000557173 1012 ntBASIC14□□□□□ -0.17
UBCP0CG48 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14□□□□□ -0.17
UBCP0CG48 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14□□□□□ -0.17
UBCP0CG48 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14□□□□□ -0.17
UBCP0CG48 GRK6P1-201ENST00000400595 1711 ntBASIC14□□□□□ -0.17
UBCP0CG48 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14□□□□□ -0.17
UBCP0CG48 AC105250.1-201ENST00000509378 2057 ntBASIC14□□□□□ -0.17
UBCP0CG48 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBCP0CG48 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.99□□□□□ -0.17
UBCP0CG48 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.99□□□□□ -0.17
UBCP0CG48 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBCP0CG48 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.99□□□□□ -0.17
UBCP0CG48 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.99□□□□□ -0.17
UBCP0CG48 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBCP0CG48 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.99□□□□□ -0.17
UBCP0CG48 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBCP0CG48 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms