Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.25□□□□□ -0.29
CTSDP07339 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.25□□□□□ -0.29
CTSDP07339 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.25□□□□□ -0.29
CTSDP07339 AC127383.1-201ENST00000444697 1800 ntBASIC13.25□□□□□ -0.29
CTSDP07339 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.25□□□□□ -0.29
CTSDP07339 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.25□□□□□ -0.29
CTSDP07339 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.25□□□□□ -0.29
CTSDP07339 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.25□□□□□ -0.29
CTSDP07339 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CTSDP07339 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.25□□□□□ -0.29
CTSDP07339 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.25□□□□□ -0.29
CTSDP07339 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.25□□□□□ -0.29
CTSDP07339 GPX1P2-201ENST00000429271 606 ntBASIC13.25□□□□□ -0.29
CTSDP07339 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.25□□□□□ -0.29
CTSDP07339 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.25□□□□□ -0.29
CTSDP07339 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.25□□□□□ -0.29
CTSDP07339 OR7E47P-204ENST00000575924 449 ntBASIC13.25□□□□□ -0.29
CTSDP07339 MIR1199-201ENST00000621445 119 ntBASIC13.25□□□□□ -0.29
CTSDP07339 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.25□□□□□ -0.29
CTSDP07339 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 AL359258.3-201ENST00000622910 2331 ntBASIC13.25□□□□□ -0.29
CTSDP07339 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.25□□□□□ -0.29
CTSDP07339 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CTSDP07339 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CTSDP07339 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.25□□□□□ -0.29
CTSDP07339 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.25□□□□□ -0.29
CTSDP07339 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CTSDP07339 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSDP07339 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CTSDP07339 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CTSDP07339 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.24□□□□□ -0.29
CTSDP07339 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
CTSDP07339 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CTSDP07339 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.24□□□□□ -0.29
CTSDP07339 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CTSDP07339 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CTSDP07339 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CTSDP07339 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CTSDP07339 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CTSDP07339 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CTSDP07339 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.24□□□□□ -0.29
CTSDP07339 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.24□□□□□ -0.29
CTSDP07339 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.24□□□□□ -0.29
CTSDP07339 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CTSDP07339 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.24□□□□□ -0.29
CTSDP07339 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CTSDP07339 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.24□□□□□ -0.29
CTSDP07339 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.24□□□□□ -0.29
CTSDP07339 AL645939.2-201ENST00000427340 991 ntBASIC13.24□□□□□ -0.29
CTSDP07339 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.24□□□□□ -0.29
CTSDP07339 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.24□□□□□ -0.29
CTSDP07339 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.24□□□□□ -0.29
CTSDP07339 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
CTSDP07339 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.24□□□□□ -0.29
CTSDP07339 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.24□□□□□ -0.29
CTSDP07339 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.24□□□□□ -0.29
CTSDP07339 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.24□□□□□ -0.29
CTSDP07339 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.24□□□□□ -0.29
CTSDP07339 AC091304.2-201ENST00000564639 760 ntBASIC13.24□□□□□ -0.29
CTSDP07339 AC002347.1-201ENST00000569543 541 ntBASIC13.24□□□□□ -0.29
CTSDP07339 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.24□□□□□ -0.29
CTSDP07339 LINC01711-201ENST00000598340 967 ntBASIC13.24□□□□□ -0.29
CTSDP07339 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.24□□□□□ -0.29
CTSDP07339 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.24□□□□□ -0.29
CTSDP07339 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.24□□□□□ -0.29
CTSDP07339 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CTSDP07339 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.24□□□□□ -0.29
CTSDP07339 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.24□□□□□ -0.29
CTSDP07339 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CTSDP07339 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CTSDP07339 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.24□□□□□ -0.29
CTSDP07339 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.24□□□□□ -0.29
CTSDP07339 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CTSDP07339 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.24□□□□□ -0.29
CTSDP07339 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.24□□□□□ -0.29
CTSDP07339 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CTSDP07339 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CTSDP07339 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.24□□□□□ -0.29
CTSDP07339 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CTSDP07339 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms