Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.94□□□□□ -0.02
PDGFAP04085 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
PDGFAP04085 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.94□□□□□ -0.02
PDGFAP04085 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.94□□□□□ -0.02
PDGFAP04085 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.94□□□□□ -0.02
PDGFAP04085 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.94□□□□□ -0.02
PDGFAP04085 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PDGFAP04085 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PDGFAP04085 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
PDGFAP04085 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.94□□□□□ -0.02
PDGFAP04085 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PDGFAP04085 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.94□□□□□ -0.02
PDGFAP04085 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PDGFAP04085 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PDGFAP04085 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PDGFAP04085 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.94□□□□□ -0.02
PDGFAP04085 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 SERBP1P3-201ENST00000459980 809 ntBASIC14.94□□□□□ -0.02
PDGFAP04085 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 AC119751.2-201ENST00000504529 210 ntBASIC14.94□□□□□ -0.02
PDGFAP04085 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.94□□□□□ -0.02
PDGFAP04085 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.94□□□□□ -0.02
PDGFAP04085 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.94□□□□□ -0.02
PDGFAP04085 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PDGFAP04085 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
PDGFAP04085 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
PDGFAP04085 AC132872.1-201ENST00000566986 1195 ntBASIC14.94□□□□□ -0.02
PDGFAP04085 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.94□□□□□ -0.02
PDGFAP04085 AC061975.2-201ENST00000581722 295 ntBASIC14.94□□□□□ -0.02
PDGFAP04085 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.94□□□□□ -0.02
PDGFAP04085 AL512343.1-201ENST00000605837 169 ntBASIC14.94□□□□□ -0.02
PDGFAP04085 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.94□□□□□ -0.02
PDGFAP04085 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.94□□□□□ -0.02
PDGFAP04085 AL109936.8-201ENST00000641772 604 ntBASIC14.94□□□□□ -0.02
PDGFAP04085 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PDGFAP04085 KRT8P12-202ENST00000472924 1397 ntBASIC14.94□□□□□ -0.02
PDGFAP04085 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.94□□□□□ -0.02
PDGFAP04085 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.94□□□□□ -0.02
PDGFAP04085 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.94□□□□□ -0.02
PDGFAP04085 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
PDGFAP04085 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFAP04085 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFAP04085 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFAP04085 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFAP04085 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFAP04085 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.93□□□□□ -0.02
PDGFAP04085 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.93□□□□□ -0.02
PDGFAP04085 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.93□□□□□ -0.02
PDGFAP04085 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFAP04085 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFAP04085 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
PDGFAP04085 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.93□□□□□ -0.02
PDGFAP04085 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFAP04085 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFAP04085 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
PDGFAP04085 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PDGFAP04085 AC093724.1-201ENST00000448659 1027 ntBASIC14.93□□□□□ -0.02
PDGFAP04085 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.93□□□□□ -0.02
PDGFAP04085 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.93□□□□□ -0.02
PDGFAP04085 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.93□□□□□ -0.02
PDGFAP04085 AC123567.1-201ENST00000548294 1261 ntBASIC14.93□□□□□ -0.02
PDGFAP04085 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
PDGFAP04085 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.93□□□□□ -0.02
PDGFAP04085 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.93□□□□□ -0.02
PDGFAP04085 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.93□□□□□ -0.02
PDGFAP04085 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.93□□□□□ -0.02
PDGFAP04085 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFAP04085 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFAP04085 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFAP04085 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
PDGFAP04085 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFAP04085 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFAP04085 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFAP04085 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFAP04085 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFAP04085 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PDGFAP04085 AC006449.5-201ENST00000610658 2098 ntBASIC14.93□□□□□ -0.02
PDGFAP04085 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
PDGFAP04085 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFAP04085 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms