Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
VTNP04004 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VTNP04004 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
VTNP04004 AC069224.1-201ENST00000566372 1715 ntBASIC17.33■□□□□ 0.37
VTNP04004 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VTNP04004 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.33■□□□□ 0.37
VTNP04004 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VTNP04004 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
VTNP04004 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
VTNP04004 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VTNP04004 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VTNP04004 MIR1909-201ENST00000411312 80 ntBASIC17.33■□□□□ 0.36
VTNP04004 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VTNP04004 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.33■□□□□ 0.36
VTNP04004 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VTNP04004 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.33■□□□□ 0.36
VTNP04004 CROCCP4-201ENST00000457096 498 ntBASIC17.33■□□□□ 0.36
VTNP04004 VDAC1P7-201ENST00000462417 847 ntBASIC17.33■□□□□ 0.36
VTNP04004 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.33■□□□□ 0.36
VTNP04004 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.33■□□□□ 0.36
VTNP04004 AL512343.1-201ENST00000605837 169 ntBASIC17.33■□□□□ 0.36
VTNP04004 AC124067.4-201ENST00000519691 2379 ntBASIC17.33■□□□□ 0.36
VTNP04004 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VTNP04004 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
VTNP04004 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.33■□□□□ 0.36
VTNP04004 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.33■□□□□ 0.36
VTNP04004 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
VTNP04004 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VTNP04004 AC084018.2-201ENST00000613093 2607 ntBASIC17.33■□□□□ 0.36
VTNP04004 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.32■□□□□ 0.36
VTNP04004 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.32■□□□□ 0.36
VTNP04004 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.32■□□□□ 0.36
VTNP04004 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
VTNP04004 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
VTNP04004 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.32■□□□□ 0.36
VTNP04004 INTS4P2-202ENST00000614726 2019 ntBASIC17.32■□□□□ 0.36
VTNP04004 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
VTNP04004 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
VTNP04004 MIR658-201ENST00000385210 100 ntBASIC17.32■□□□□ 0.36
VTNP04004 AC134915.1-201ENST00000426461 574 ntBASIC17.32■□□□□ 0.36
VTNP04004 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.32■□□□□ 0.36
VTNP04004 AL162726.2-201ENST00000438986 1017 ntBASIC17.32■□□□□ 0.36
VTNP04004 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
VTNP04004 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.32■□□□□ 0.36
VTNP04004 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.32■□□□□ 0.36
VTNP04004 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.32■□□□□ 0.36
VTNP04004 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.32■□□□□ 0.36
VTNP04004 MIR4313-201ENST00000580760 101 ntBASIC17.32■□□□□ 0.36
VTNP04004 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.32■□□□□ 0.36
VTNP04004 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.32■□□□□ 0.36
VTNP04004 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.32■□□□□ 0.36
VTNP04004 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.32■□□□□ 0.36
VTNP04004 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.32■□□□□ 0.36
VTNP04004 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
VTNP04004 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
VTNP04004 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.32■□□□□ 0.36
VTNP04004 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.32■□□□□ 0.36
VTNP04004 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
VTNP04004 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
VTNP04004 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VTNP04004 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VTNP04004 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.31■□□□□ 0.36
VTNP04004 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VTNP04004 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
VTNP04004 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VTNP04004 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VTNP04004 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.31■□□□□ 0.36
VTNP04004 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
VTNP04004 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.31■□□□□ 0.36
VTNP04004 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.31■□□□□ 0.36
VTNP04004 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.31■□□□□ 0.36
VTNP04004 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VTNP04004 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VTNP04004 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
VTNP04004 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VTNP04004 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
VTNP04004 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VTNP04004 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.31■□□□□ 0.36
VTNP04004 USP32P1-208ENST00000506594 1164 ntBASIC17.31■□□□□ 0.36
VTNP04004 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms