Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
APOA1P02647 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.27□□□□□ -0.12
APOA1P02647 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOA1P02647 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
APOA1P02647 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.27□□□□□ -0.12
APOA1P02647 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOA1P02647 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOA1P02647 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOA1P02647 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APOA1P02647 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
APOA1P02647 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOA1P02647 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.27□□□□□ -0.12
APOA1P02647 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOA1P02647 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
APOA1P02647 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
APOA1P02647 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.27□□□□□ -0.13
APOA1P02647 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOA1P02647 LINC00982-205ENST00000420957 435 ntBASIC14.27□□□□□ -0.13
APOA1P02647 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.27□□□□□ -0.13
APOA1P02647 SLC25A3P1-201ENST00000443844 931 ntBASIC14.27□□□□□ -0.13
APOA1P02647 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.27□□□□□ -0.13
APOA1P02647 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.27□□□□□ -0.13
APOA1P02647 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.27□□□□□ -0.13
APOA1P02647 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOA1P02647 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOA1P02647 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOA1P02647 AC091951.1-201ENST00000512854 2465 ntBASIC14.27□□□□□ -0.13
APOA1P02647 FGD5P1-202ENST00000614866 2498 ntBASIC14.27□□□□□ -0.13
APOA1P02647 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOA1P02647 AC009090.5-201ENST00000624886 2285 ntBASIC14.27□□□□□ -0.13
APOA1P02647 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
APOA1P02647 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.27□□□□□ -0.13
APOA1P02647 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.27□□□□□ -0.13
APOA1P02647 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.27□□□□□ -0.13
APOA1P02647 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOA1P02647 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOA1P02647 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.27□□□□□ -0.13
APOA1P02647 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOA1P02647 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOA1P02647 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.27□□□□□ -0.13
APOA1P02647 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
APOA1P02647 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.27□□□□□ -0.13
APOA1P02647 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
APOA1P02647 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
APOA1P02647 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 AGAP7P-201ENST00000582299 2062 ntBASIC14.26□□□□□ -0.13
APOA1P02647 AGAP14-201ENST00000624701 2060 ntBASIC14.26□□□□□ -0.13
APOA1P02647 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.26□□□□□ -0.13
APOA1P02647 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
APOA1P02647 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.26□□□□□ -0.13
APOA1P02647 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
APOA1P02647 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.26□□□□□ -0.13
APOA1P02647 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 AC246785.2-201ENST00000432512 513 ntBASIC14.26□□□□□ -0.13
APOA1P02647 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 TSPY15P-201ENST00000457163 923 ntBASIC14.26□□□□□ -0.13
APOA1P02647 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.26□□□□□ -0.13
APOA1P02647 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.26□□□□□ -0.13
APOA1P02647 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
APOA1P02647 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
APOA1P02647 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
APOA1P02647 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
APOA1P02647 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
APOA1P02647 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOA1P02647 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.26□□□□□ -0.13
APOA1P02647 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
APOA1P02647 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms