Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LMNAP02545 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LMNAP02545 AC092364.2-201ENST00000596710 2692 ntBASIC16.71■□□□□ 0.26
LMNAP02545 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMNAP02545 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMNAP02545 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMNAP02545 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMNAP02545 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LMNAP02545 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LMNAP02545 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.7■□□□□ 0.26
LMNAP02545 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LMNAP02545 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LMNAP02545 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
LMNAP02545 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LMNAP02545 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LMNAP02545 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMNAP02545 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMNAP02545 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.7■□□□□ 0.26
LMNAP02545 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.7■□□□□ 0.26
LMNAP02545 GNAQP1-201ENST00000444815 1067 ntBASIC16.7■□□□□ 0.26
LMNAP02545 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.7■□□□□ 0.26
LMNAP02545 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.7■□□□□ 0.26
LMNAP02545 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LMNAP02545 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.7■□□□□ 0.26
LMNAP02545 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.7■□□□□ 0.26
LMNAP02545 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.7■□□□□ 0.26
LMNAP02545 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMNAP02545 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMNAP02545 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMNAP02545 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.7■□□□□ 0.26
LMNAP02545 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.7■□□□□ 0.26
LMNAP02545 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMNAP02545 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LMNAP02545 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMNAP02545 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.7■□□□□ 0.26
LMNAP02545 FAM45BP-202ENST00000592932 1624 ntBASIC16.7■□□□□ 0.26
LMNAP02545 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.7■□□□□ 0.26
LMNAP02545 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.7■□□□□ 0.26
LMNAP02545 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMNAP02545 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LMNAP02545 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LMNAP02545 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LMNAP02545 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LMNAP02545 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.69■□□□□ 0.26
LMNAP02545 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.69■□□□□ 0.26
LMNAP02545 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.69■□□□□ 0.26
LMNAP02545 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LMNAP02545 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LMNAP02545 AL035456.1-201ENST00000456064 1369 ntBASIC16.69■□□□□ 0.26
LMNAP02545 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LMNAP02545 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.69■□□□□ 0.26
LMNAP02545 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LMNAP02545 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LMNAP02545 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 AC135586.1-201ENST00000539323 574 ntBASIC16.69■□□□□ 0.26
LMNAP02545 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.69■□□□□ 0.26
LMNAP02545 AC124947.2-201ENST00000547118 1133 ntBASIC16.69■□□□□ 0.26
LMNAP02545 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.69■□□□□ 0.26
LMNAP02545 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.69■□□□□ 0.26
LMNAP02545 GPR182-203ENST00000622922 591 ntBASIC16.69■□□□□ 0.26
LMNAP02545 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.69■□□□□ 0.26
LMNAP02545 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LMNAP02545 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
LMNAP02545 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LMNAP02545 AC006058.4-201ENST00000624016 1670 ntBASIC16.69■□□□□ 0.26
LMNAP02545 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LMNAP02545 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LMNAP02545 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.68■□□□□ 0.26
LMNAP02545 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.68■□□□□ 0.26
LMNAP02545 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
LMNAP02545 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.68■□□□□ 0.26
LMNAP02545 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LMNAP02545 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms