Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 AC004987.2-201ENST00000395959 1148 ntBASIC15.47■□□□□ 0.07
KRT6AP02538 MIR940-201ENST00000401276 94 ntBASIC15.47■□□□□ 0.07
KRT6AP02538 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.47■□□□□ 0.07
KRT6AP02538 MCCD1P2-201ENST00000423228 335 ntBASIC15.47■□□□□ 0.07
KRT6AP02538 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.47■□□□□ 0.07
KRT6AP02538 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.47■□□□□ 0.07
KRT6AP02538 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.47■□□□□ 0.07
KRT6AP02538 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.47■□□□□ 0.07
KRT6AP02538 KRT8P23-201ENST00000560090 1207 ntBASIC15.47■□□□□ 0.07
KRT6AP02538 AC026120.1-201ENST00000611536 926 ntBASIC15.47■□□□□ 0.07
KRT6AP02538 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.47■□□□□ 0.07
KRT6AP02538 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.47■□□□□ 0.07
KRT6AP02538 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
KRT6AP02538 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.47■□□□□ 0.07
KRT6AP02538 SSR4P1-203ENST00000599569 2260 ntBASIC15.47■□□□□ 0.07
KRT6AP02538 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.47■□□□□ 0.07
KRT6AP02538 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
KRT6AP02538 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.47■□□□□ 0.07
KRT6AP02538 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT6AP02538 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT6AP02538 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT6AP02538 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.46■□□□□ 0.07
KRT6AP02538 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
KRT6AP02538 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT6AP02538 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
KRT6AP02538 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT6AP02538 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.46■□□□□ 0.07
KRT6AP02538 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
KRT6AP02538 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT6AP02538 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT6AP02538 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
KRT6AP02538 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KRT6AP02538 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT6AP02538 HLA-H-201ENST00000383620 1096 ntBASIC15.46■□□□□ 0.07
KRT6AP02538 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT6AP02538 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.46■□□□□ 0.07
KRT6AP02538 ADH5P3-201ENST00000433842 1137 ntBASIC15.46■□□□□ 0.07
KRT6AP02538 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.46■□□□□ 0.07
KRT6AP02538 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
KRT6AP02538 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.46■□□□□ 0.07
KRT6AP02538 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.46■□□□□ 0.07
KRT6AP02538 KRT18P58-201ENST00000527480 1120 ntBASIC15.46■□□□□ 0.07
KRT6AP02538 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.46■□□□□ 0.07
KRT6AP02538 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.46■□□□□ 0.07
KRT6AP02538 AC243562.1-201ENST00000560672 389 ntBASIC15.46■□□□□ 0.07
KRT6AP02538 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.46■□□□□ 0.07
KRT6AP02538 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.46■□□□□ 0.07
KRT6AP02538 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT6AP02538 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KRT6AP02538 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT6AP02538 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.46■□□□□ 0.07
KRT6AP02538 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT6AP02538 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT6AP02538 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
KRT6AP02538 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.46■□□□□ 0.07
KRT6AP02538 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
KRT6AP02538 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
KRT6AP02538 AC087481.3-201ENST00000602886 1894 ntBASIC15.46■□□□□ 0.06
KRT6AP02538 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
KRT6AP02538 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
KRT6AP02538 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
KRT6AP02538 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT6AP02538 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT6AP02538 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT6AP02538 BNIP3P1-202ENST00000550043 1585 ntBASIC15.45■□□□□ 0.06
KRT6AP02538 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
KRT6AP02538 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT6AP02538 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
KRT6AP02538 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
KRT6AP02538 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.45■□□□□ 0.06
KRT6AP02538 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT6AP02538 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.45■□□□□ 0.06
KRT6AP02538 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT6AP02538 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.45■□□□□ 0.06
KRT6AP02538 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.45■□□□□ 0.06
KRT6AP02538 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.45■□□□□ 0.06
KRT6AP02538 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
KRT6AP02538 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT6AP02538 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT6AP02538 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
KRT6AP02538 MIR346-201ENST00000362234 95 ntBASIC15.45■□□□□ 0.06
KRT6AP02538 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT6AP02538 YBX2P1-201ENST00000394192 760 ntBASIC15.45■□□□□ 0.06
KRT6AP02538 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.45■□□□□ 0.06
KRT6AP02538 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT6AP02538 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.45■□□□□ 0.06
KRT6AP02538 AP000842.3-202ENST00000569238 1080 ntBASIC15.45■□□□□ 0.06
KRT6AP02538 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.45■□□□□ 0.06
KRT6AP02538 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.45■□□□□ 0.06
KRT6AP02538 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
KRT6AP02538 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms