Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 ANKRD20A18P-201ENST00000359341 492 ntBASIC12.65□□□□□ -0.38
IFNA1P01562 MDFI-202ENST00000373050 809 ntTSL 2 BASIC12.65□□□□□ -0.38
IFNA1P01562 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.65□□□□□ -0.38
IFNA1P01562 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC12.65□□□□□ -0.38
IFNA1P01562 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
IFNA1P01562 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.65□□□□□ -0.38
IFNA1P01562 FAM201B-201ENST00000458407 597 ntBASIC12.65□□□□□ -0.38
IFNA1P01562 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 CD99P1-205ENST00000527459 561 ntBASIC12.65□□□□□ -0.38
IFNA1P01562 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.65□□□□□ -0.38
IFNA1P01562 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.65□□□□□ -0.38
IFNA1P01562 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
IFNA1P01562 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.65□□□□□ -0.38
IFNA1P01562 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.65□□□□□ -0.38
IFNA1P01562 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.65□□□□□ -0.38
IFNA1P01562 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
IFNA1P01562 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.65□□□□□ -0.38
IFNA1P01562 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
IFNA1P01562 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.65□□□□□ -0.38
IFNA1P01562 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.65□□□□□ -0.39
IFNA1P01562 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.65□□□□□ -0.39
IFNA1P01562 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.64□□□□□ -0.39
IFNA1P01562 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.64□□□□□ -0.39
IFNA1P01562 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.64□□□□□ -0.39
IFNA1P01562 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.64□□□□□ -0.39
IFNA1P01562 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.64□□□□□ -0.39
IFNA1P01562 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.64□□□□□ -0.39
IFNA1P01562 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.64□□□□□ -0.39
IFNA1P01562 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.64□□□□□ -0.39
IFNA1P01562 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.64□□□□□ -0.39
IFNA1P01562 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
IFNA1P01562 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 AC148477.5-201ENST00000625164 1645 ntBASIC12.64□□□□□ -0.39
IFNA1P01562 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 MIR935-201ENST00000401179 91 ntBASIC12.64□□□□□ -0.39
IFNA1P01562 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.64□□□□□ -0.39
IFNA1P01562 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC12.64□□□□□ -0.39
IFNA1P01562 AC092597.1-201ENST00000487352 616 ntBASIC12.64□□□□□ -0.39
IFNA1P01562 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.64□□□□□ -0.39
IFNA1P01562 MIR4651-201ENST00000582622 73 ntBASIC12.64□□□□□ -0.39
IFNA1P01562 AL353801.3-201ENST00000609898 542 ntBASIC12.64□□□□□ -0.39
IFNA1P01562 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC12.64□□□□□ -0.39
IFNA1P01562 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.64□□□□□ -0.39
IFNA1P01562 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
IFNA1P01562 KRT8P44-201ENST00000441609 1350 ntBASIC12.64□□□□□ -0.39
IFNA1P01562 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.64□□□□□ -0.39
IFNA1P01562 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.39
IFNA1P01562 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IFNA1P01562 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.64□□□□□ -0.39
IFNA1P01562 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.63□□□□□ -0.39
IFNA1P01562 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.63□□□□□ -0.39
IFNA1P01562 AC041040.2-201ENST00000622926 2899 ntBASIC12.63□□□□□ -0.39
IFNA1P01562 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
IFNA1P01562 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.63□□□□□ -0.39
IFNA1P01562 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.63□□□□□ -0.39
IFNA1P01562 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
IFNA1P01562 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
IFNA1P01562 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.63□□□□□ -0.39
IFNA1P01562 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.63□□□□□ -0.39
IFNA1P01562 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.63□□□□□ -0.39
IFNA1P01562 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms