Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MTHFR-217ENST00000641820 1569 ntBASIC14.2□□□□□ -0.14
CNOT4O95628 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CNOT4O95628 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT4O95628 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT4O95628 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT4O95628 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT4O95628 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.19□□□□□ -0.14
CNOT4O95628 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CNOT4O95628 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.19□□□□□ -0.14
CNOT4O95628 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.19□□□□□ -0.14
CNOT4O95628 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 AL691432.1-201ENST00000596308 1422 ntBASIC14.19□□□□□ -0.14
CNOT4O95628 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.19□□□□□ -0.14
CNOT4O95628 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.19□□□□□ -0.14
CNOT4O95628 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 RPL37AP1-201ENST00000412502 279 ntBASIC14.19□□□□□ -0.14
CNOT4O95628 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.19□□□□□ -0.14
CNOT4O95628 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.19□□□□□ -0.14
CNOT4O95628 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.19□□□□□ -0.14
CNOT4O95628 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.19□□□□□ -0.14
CNOT4O95628 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.19□□□□□ -0.14
CNOT4O95628 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.19□□□□□ -0.14
CNOT4O95628 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.19□□□□□ -0.14
CNOT4O95628 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.19□□□□□ -0.14
CNOT4O95628 MIR6069-201ENST00000620069 79 ntBASIC14.19□□□□□ -0.14
CNOT4O95628 AL358472.5-202ENST00000641448 1267 ntBASIC14.19□□□□□ -0.14
CNOT4O95628 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CNOT4O95628 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CNOT4O95628 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CNOT4O95628 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CNOT4O95628 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.19□□□□□ -0.14
CNOT4O95628 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT4O95628 BTBD7P1-201ENST00000447253 1453 ntBASIC14.18□□□□□ -0.14
CNOT4O95628 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CNOT4O95628 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.18□□□□□ -0.14
CNOT4O95628 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CNOT4O95628 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
CNOT4O95628 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.18□□□□□ -0.14
CNOT4O95628 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.18□□□□□ -0.14
CNOT4O95628 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 CYP4F24P-201ENST00000586049 1580 ntBASIC14.18□□□□□ -0.14
CNOT4O95628 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.18□□□□□ -0.14
CNOT4O95628 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CNOT4O95628 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CNOT4O95628 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CNOT4O95628 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 HAUS4P1-201ENST00000406739 1145 ntBASIC14.18□□□□□ -0.14
CNOT4O95628 TSSK5P-201ENST00000423978 907 ntBASIC14.18□□□□□ -0.14
CNOT4O95628 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.18□□□□□ -0.14
CNOT4O95628 EEF1DP4-201ENST00000446006 880 ntBASIC14.18□□□□□ -0.14
CNOT4O95628 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.18□□□□□ -0.14
CNOT4O95628 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.18□□□□□ -0.14
CNOT4O95628 AC004890.2-204ENST00000481968 304 ntBASIC14.18□□□□□ -0.14
CNOT4O95628 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.18□□□□□ -0.14
CNOT4O95628 AP005018.1-201ENST00000525475 301 ntBASIC14.18□□□□□ -0.14
CNOT4O95628 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.18□□□□□ -0.14
CNOT4O95628 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.18□□□□□ -0.14
CNOT4O95628 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.18□□□□□ -0.14
CNOT4O95628 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.18□□□□□ -0.14
CNOT4O95628 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms