Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.07□□□□□ -0.16
KDM4BO94953 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KDM4BO94953 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDM4BO94953 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KDM4BO94953 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDM4BO94953 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDM4BO94953 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
KDM4BO94953 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
KDM4BO94953 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDM4BO94953 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.07□□□□□ -0.16
KDM4BO94953 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
KDM4BO94953 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDM4BO94953 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KDM4BO94953 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.07□□□□□ -0.16
KDM4BO94953 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.07□□□□□ -0.16
KDM4BO94953 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
KDM4BO94953 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.07□□□□□ -0.16
KDM4BO94953 FAM185BP-201ENST00000443595 716 ntBASIC14.07□□□□□ -0.16
KDM4BO94953 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.07□□□□□ -0.16
KDM4BO94953 AL691432.3-201ENST00000621860 400 ntBASIC14.07□□□□□ -0.16
KDM4BO94953 AC148477.8-201ENST00000624298 468 ntBASIC14.07□□□□□ -0.16
KDM4BO94953 FAM215A-202ENST00000632077 792 ntBASIC14.07□□□□□ -0.16
KDM4BO94953 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
KDM4BO94953 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDM4BO94953 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDM4BO94953 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDM4BO94953 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
KDM4BO94953 AC092919.2-201ENST00000623631 1645 ntBASIC14.07□□□□□ -0.16
KDM4BO94953 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.07□□□□□ -0.16
KDM4BO94953 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
KDM4BO94953 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDM4BO94953 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KDM4BO94953 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDM4BO94953 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.07□□□□□ -0.16
KDM4BO94953 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KDM4BO94953 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDM4BO94953 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.07□□□□□ -0.16
KDM4BO94953 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
KDM4BO94953 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.06□□□□□ -0.16
KDM4BO94953 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
KDM4BO94953 AC026748.1-201ENST00000624349 3251 ntBASIC14.06□□□□□ -0.16
KDM4BO94953 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.06□□□□□ -0.16
KDM4BO94953 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.06□□□□□ -0.16
KDM4BO94953 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.06□□□□□ -0.16
KDM4BO94953 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.06□□□□□ -0.16
KDM4BO94953 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.06□□□□□ -0.16
KDM4BO94953 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
KDM4BO94953 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.06□□□□□ -0.16
KDM4BO94953 PRSS29P-201ENST00000440800 595 ntBASIC14.06□□□□□ -0.16
KDM4BO94953 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.06□□□□□ -0.16
KDM4BO94953 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.06□□□□□ -0.16
KDM4BO94953 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.06□□□□□ -0.16
KDM4BO94953 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.06□□□□□ -0.16
KDM4BO94953 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.06□□□□□ -0.16
KDM4BO94953 MIR4515-201ENST00000584082 81 ntBASIC14.06□□□□□ -0.16
KDM4BO94953 ACTL9-202ENST00000612068 1252 ntBASIC14.06□□□□□ -0.16
KDM4BO94953 AC117500.6-201ENST00000624871 588 ntBASIC14.06□□□□□ -0.16
KDM4BO94953 AC007686.3-201ENST00000619017 3487 ntBASIC14.06□□□□□ -0.16
KDM4BO94953 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
KDM4BO94953 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
KDM4BO94953 AC006486.2-201ENST00000624246 2199 ntBASIC14.06□□□□□ -0.16
KDM4BO94953 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
KDM4BO94953 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDM4BO94953 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
KDM4BO94953 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
KDM4BO94953 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KDM4BO94953 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KDM4BO94953 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.05□□□□□ -0.16
KDM4BO94953 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KDM4BO94953 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KDM4BO94953 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.05□□□□□ -0.16
KDM4BO94953 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.05□□□□□ -0.16
KDM4BO94953 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
KDM4BO94953 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.05□□□□□ -0.16
KDM4BO94953 AC079781.5-202ENST00000641784 3743 ntBASIC14.05□□□□□ -0.16
KDM4BO94953 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.05□□□□□ -0.16
KDM4BO94953 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KDM4BO94953 AC004870.1-201ENST00000315132 882 ntBASIC14.05□□□□□ -0.16
KDM4BO94953 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
KDM4BO94953 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms