Protein–RNA interactions for Protein: O94876

TMCC1, Transmembrane and coiled-coil domains protein 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1O94876 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
TMCC1O94876 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMCC1O94876 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMCC1O94876 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMCC1O94876 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMCC1O94876 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TMCC1O94876 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.41■□□□□ 0.22
TMCC1O94876 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMCC1O94876 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMCC1O94876 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
TMCC1O94876 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.41■□□□□ 0.22
TMCC1O94876 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMCC1O94876 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TMCC1O94876 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMCC1O94876 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMCC1O94876 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMCC1O94876 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMCC1O94876 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMCC1O94876 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TMCC1O94876 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TMCC1O94876 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
TMCC1O94876 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMCC1O94876 CETN4P-206ENST00000642099 2168 ntBASIC16.4■□□□□ 0.22
TMCC1O94876 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
TMCC1O94876 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TMCC1O94876 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMCC1O94876 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMCC1O94876 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TMCC1O94876 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.4■□□□□ 0.22
TMCC1O94876 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.4■□□□□ 0.22
TMCC1O94876 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.4■□□□□ 0.22
TMCC1O94876 AC092580.3-201ENST00000430932 139 ntBASIC16.4■□□□□ 0.22
TMCC1O94876 AC055876.3-201ENST00000431496 288 ntBASIC16.4■□□□□ 0.22
TMCC1O94876 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.4■□□□□ 0.22
TMCC1O94876 AC097493.3-201ENST00000509725 367 ntBASIC16.4■□□□□ 0.22
TMCC1O94876 IGHV3-42-201ENST00000520410 361 ntBASIC16.4■□□□□ 0.22
TMCC1O94876 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TMCC1O94876 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.4■□□□□ 0.22
TMCC1O94876 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.4■□□□□ 0.22
TMCC1O94876 AC138649.4-201ENST00000612222 287 ntBASIC16.4■□□□□ 0.22
TMCC1O94876 AL138828.2-201ENST00000615812 383 ntBASIC16.4■□□□□ 0.22
TMCC1O94876 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.4■□□□□ 0.22
TMCC1O94876 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMCC1O94876 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.4■□□□□ 0.22
TMCC1O94876 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.4■□□□□ 0.22
TMCC1O94876 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMCC1O94876 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.4■□□□□ 0.22
TMCC1O94876 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMCC1O94876 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMCC1O94876 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.4■□□□□ 0.22
TMCC1O94876 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMCC1O94876 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.4■□□□□ 0.22
TMCC1O94876 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMCC1O94876 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
TMCC1O94876 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMCC1O94876 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.4■□□□□ 0.22
TMCC1O94876 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.4■□□□□ 0.22
TMCC1O94876 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMCC1O94876 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.39■□□□□ 0.22
TMCC1O94876 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
TMCC1O94876 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.39■□□□□ 0.22
TMCC1O94876 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.39■□□□□ 0.22
TMCC1O94876 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
TMCC1O94876 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.22
TMCC1O94876 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMCC1O94876 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMCC1O94876 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMCC1O94876 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMCC1O94876 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.39■□□□□ 0.21
TMCC1O94876 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMCC1O94876 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMCC1O94876 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TMCC1O94876 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMCC1O94876 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.39■□□□□ 0.21
TMCC1O94876 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMCC1O94876 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMCC1O94876 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMCC1O94876 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMCC1O94876 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMCC1O94876 HAUS4P1-201ENST00000406739 1145 ntBASIC16.39■□□□□ 0.21
TMCC1O94876 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMCC1O94876 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
TMCC1O94876 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TMCC1O94876 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMCC1O94876 HLA-V-204ENST00000476601 1289 ntBASIC16.39■□□□□ 0.21
TMCC1O94876 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.39■□□□□ 0.21
TMCC1O94876 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TMCC1O94876 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.39■□□□□ 0.21
TMCC1O94876 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.39■□□□□ 0.21
TMCC1O94876 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.39■□□□□ 0.21
TMCC1O94876 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TMCC1O94876 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
TMCC1O94876 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TMCC1O94876 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMCC1O94876 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMCC1O94876 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMCC1O94876 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMCC1O94876 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMCC1O94876 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
TMCC1O94876 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms