Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CUBNO60494 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.51□□□□□ -0.41
CUBNO60494 AC093433.1-201ENST00000458048 571 ntBASIC12.51□□□□□ -0.41
CUBNO60494 CTBP2P4-201ENST00000513884 920 ntBASIC12.51□□□□□ -0.41
CUBNO60494 AC022217.1-201ENST00000521069 738 ntBASIC12.51□□□□□ -0.41
CUBNO60494 AC126915.1-201ENST00000522847 1038 ntBASIC12.51□□□□□ -0.41
CUBNO60494 RN7SL48P-201ENST00000579283 293 ntBASIC12.51□□□□□ -0.41
CUBNO60494 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 AC093813.1-201ENST00000605066 256 ntBASIC12.51□□□□□ -0.41
CUBNO60494 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CUBNO60494 HLA-C-210ENST00000640219 976 ntBASIC12.51□□□□□ -0.41
CUBNO60494 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.51□□□□□ -0.41
CUBNO60494 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.51□□□□□ -0.41
CUBNO60494 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CUBNO60494 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 FLJ38576-201ENST00000623820 2459 ntBASIC12.51□□□□□ -0.41
CUBNO60494 KRT8P35-201ENST00000483942 1338 ntBASIC12.51□□□□□ -0.41
CUBNO60494 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.5□□□□□ -0.41
CUBNO60494 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.5□□□□□ -0.41
CUBNO60494 PGR-209ENST00000617858 2816 ntTSL 5 BASIC12.5□□□□□ -0.41
CUBNO60494 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CUBNO60494 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CUBNO60494 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CUBNO60494 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.5□□□□□ -0.41
CUBNO60494 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.5□□□□□ -0.41
CUBNO60494 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.5□□□□□ -0.41
CUBNO60494 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.5□□□□□ -0.41
CUBNO60494 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.5□□□□□ -0.41
CUBNO60494 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.5□□□□□ -0.41
CUBNO60494 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CUBNO60494 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.5□□□□□ -0.41
CUBNO60494 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 AL359258.3-201ENST00000622910 2331 ntBASIC12.5□□□□□ -0.41
CUBNO60494 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CUBNO60494 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.5□□□□□ -0.41
CUBNO60494 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC12.5□□□□□ -0.41
CUBNO60494 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.5□□□□□ -0.41
CUBNO60494 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC12.5□□□□□ -0.41
CUBNO60494 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.5□□□□□ -0.41
CUBNO60494 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.5□□□□□ -0.41
CUBNO60494 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.5□□□□□ -0.41
CUBNO60494 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.5□□□□□ -0.41
CUBNO60494 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC12.5□□□□□ -0.41
CUBNO60494 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.5□□□□□ -0.41
CUBNO60494 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.5□□□□□ -0.41
CUBNO60494 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC12.5□□□□□ -0.41
CUBNO60494 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 AC022188.1-201ENST00000620960 1664 ntBASIC12.5□□□□□ -0.41
CUBNO60494 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.5□□□□□ -0.41
CUBNO60494 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC12.5□□□□□ -0.41
CUBNO60494 CEP164P1-201ENST00000455142 418 ntBASIC12.5□□□□□ -0.41
CUBNO60494 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.5□□□□□ -0.41
CUBNO60494 AC024681.1-201ENST00000521917 487 ntBASIC12.5□□□□□ -0.41
CUBNO60494 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.5□□□□□ -0.41
CUBNO60494 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 MIR3147-201ENST00000577811 66 ntBASIC12.5□□□□□ -0.41
CUBNO60494 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.5□□□□□ -0.41
CUBNO60494 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
CUBNO60494 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CUBNO60494 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CUBNO60494 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.5□□□□□ -0.41
CUBNO60494 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CUBNO60494 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.49□□□□□ -0.41
CUBNO60494 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CUBNO60494 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC12.49□□□□□ -0.41
CUBNO60494 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CUBNO60494 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.49□□□□□ -0.41
CUBNO60494 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.49□□□□□ -0.41
CUBNO60494 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.49□□□□□ -0.41
CUBNO60494 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC12.49□□□□□ -0.41
CUBNO60494 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.49□□□□□ -0.41
CUBNO60494 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms