Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2AO43633 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMP2AO43633 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMP2AO43633 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.87■□□□□ 0.45
CHMP2AO43633 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
CHMP2AO43633 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.87■□□□□ 0.45
CHMP2AO43633 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.87■□□□□ 0.45
CHMP2AO43633 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
CHMP2AO43633 TARDBPP1-201ENST00000442013 1203 ntBASIC17.87■□□□□ 0.45
CHMP2AO43633 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP2AO43633 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMP2AO43633 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 DOC2GP-202ENST00000514950 1163 ntBASIC17.87■□□□□ 0.45
CHMP2AO43633 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
CHMP2AO43633 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.87■□□□□ 0.45
CHMP2AO43633 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
CHMP2AO43633 HNRNPUP1-201ENST00000554987 333 ntBASIC17.87■□□□□ 0.45
CHMP2AO43633 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.87■□□□□ 0.45
CHMP2AO43633 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CHMP2AO43633 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHMP2AO43633 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP2AO43633 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.87■□□□□ 0.45
CHMP2AO43633 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CHMP2AO43633 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMP2AO43633 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP2AO43633 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2AO43633 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.86■□□□□ 0.45
CHMP2AO43633 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP2AO43633 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CHMP2AO43633 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CHMP2AO43633 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CHMP2AO43633 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.86■□□□□ 0.45
CHMP2AO43633 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
CHMP2AO43633 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHMP2AO43633 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP2AO43633 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 AL035633.1-201ENST00000406139 838 ntBASIC17.86■□□□□ 0.45
CHMP2AO43633 AC074338.1-201ENST00000416825 156 ntBASIC17.86■□□□□ 0.45
CHMP2AO43633 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP2AO43633 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.86■□□□□ 0.45
CHMP2AO43633 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP2AO43633 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 SRD5A3P1-201ENST00000603021 949 ntBASIC17.86■□□□□ 0.45
CHMP2AO43633 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CHMP2AO43633 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CHMP2AO43633 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CHMP2AO43633 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
CHMP2AO43633 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP2AO43633 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2AO43633 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 AC008894.3-201ENST00000624324 3103 ntBASIC17.85■□□□□ 0.45
CHMP2AO43633 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CHMP2AO43633 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CHMP2AO43633 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP2AO43633 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CHMP2AO43633 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms