Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC027612.1-201ENST00000445234 2395 ntBASIC15.25■□□□□ 0.03
PDLIM1O00151 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM1O00151 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM1O00151 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
PDLIM1O00151 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PDLIM1O00151 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
PDLIM1O00151 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM1O00151 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
PDLIM1O00151 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.25■□□□□ 0.03
PDLIM1O00151 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.25■□□□□ 0.03
PDLIM1O00151 AC073621.1-201ENST00000392730 636 ntBASIC15.25■□□□□ 0.03
PDLIM1O00151 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.25■□□□□ 0.03
PDLIM1O00151 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.25■□□□□ 0.03
PDLIM1O00151 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
PDLIM1O00151 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.25■□□□□ 0.03
PDLIM1O00151 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.25■□□□□ 0.03
PDLIM1O00151 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.25■□□□□ 0.03
PDLIM1O00151 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.25■□□□□ 0.03
PDLIM1O00151 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM1O00151 AC006557.2-201ENST00000592985 1240 ntBASIC15.25■□□□□ 0.03
PDLIM1O00151 AL353135.1-201ENST00000606729 504 ntBASIC15.25■□□□□ 0.03
PDLIM1O00151 AL139424.1-201ENST00000607572 797 ntBASIC15.25■□□□□ 0.03
PDLIM1O00151 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM1O00151 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC15.25■□□□□ 0.03
PDLIM1O00151 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PDLIM1O00151 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM1O00151 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM1O00151 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM1O00151 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM1O00151 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM1O00151 TCAF1P1-201ENST00000414990 2232 ntBASIC15.25■□□□□ 0.03
PDLIM1O00151 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM1O00151 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.25■□□□□ 0.03
PDLIM1O00151 AC131009.4-201ENST00000624048 1740 ntBASIC15.25■□□□□ 0.03
PDLIM1O00151 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM1O00151 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.25■□□□□ 0.03
PDLIM1O00151 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PDLIM1O00151 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM1O00151 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
PDLIM1O00151 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM1O00151 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.25■□□□□ 0.03
PDLIM1O00151 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM1O00151 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.25■□□□□ 0.03
PDLIM1O00151 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PDLIM1O00151 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.24■□□□□ 0.03
PDLIM1O00151 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 AL592424.1-201ENST00000563624 1536 ntBASIC15.24■□□□□ 0.03
PDLIM1O00151 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.24■□□□□ 0.03
PDLIM1O00151 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.24■□□□□ 0.03
PDLIM1O00151 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PDLIM1O00151 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.24■□□□□ 0.03
PDLIM1O00151 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.24■□□□□ 0.03
PDLIM1O00151 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.24■□□□□ 0.03
PDLIM1O00151 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.24■□□□□ 0.03
PDLIM1O00151 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.24■□□□□ 0.03
PDLIM1O00151 AC105339.3-201ENST00000560043 636 ntBASIC15.24■□□□□ 0.03
PDLIM1O00151 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.24■□□□□ 0.03
PDLIM1O00151 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.24■□□□□ 0.03
PDLIM1O00151 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.24■□□□□ 0.03
PDLIM1O00151 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PDLIM1O00151 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.24■□□□□ 0.03
PDLIM1O00151 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PDLIM1O00151 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM1O00151 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM1O00151 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM1O00151 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM1O00151 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM1O00151 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM1O00151 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM1O00151 HAL-202ENST00000538703 2637 ntTSL 2 BASIC15.23■□□□□ 0.03
PDLIM1O00151 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM1O00151 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC15.23■□□□□ 0.03
PDLIM1O00151 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.23■□□□□ 0.03
PDLIM1O00151 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PDLIM1O00151 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PDLIM1O00151 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms