Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
NPIPA2E9PIF3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 SPDYE19P-201ENST00000338590 713 ntBASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 DOC2GP-202ENST00000514950 1163 ntBASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 ZNF890P-202ENST00000530367 1156 ntBASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 MIR6069-201ENST00000620069 79 ntBASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
NPIPA2E9PIF3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 SPDYE17-201ENST00000412399 783 ntBASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 TP53TG3HP-202ENST00000569755 579 ntBASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA2E9PIF3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 AL513523.2-202ENST00000427283 2040 ntBASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 AC008894.3-201ENST00000624324 3103 ntBASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms