Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 AC117489.1-201ENST00000625169 3217 ntBASIC11.21□□□□□ -0.61
LINC01546A6NGU7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 BNIP3P1-202ENST00000550043 1585 ntBASIC11.21□□□□□ -0.61
LINC01546A6NGU7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 AK4P3-201ENST00000418260 669 ntBASIC11.21□□□□□ -0.61
LINC01546A6NGU7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
LINC01546A6NGU7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01546A6NGU7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01546A6NGU7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01546A6NGU7 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01546A6NGU7 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC11.21□□□□□ -0.62
LINC01546A6NGU7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
LINC01546A6NGU7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC11.21□□□□□ -0.62
LINC01546A6NGU7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01546A6NGU7 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC11.21□□□□□ -0.62
LINC01546A6NGU7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC11.21□□□□□ -0.62
LINC01546A6NGU7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.21□□□□□ -0.62
LINC01546A6NGU7 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
LINC01546A6NGU7 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.21□□□□□ -0.62
LINC01546A6NGU7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01546A6NGU7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC11.21□□□□□ -0.62
LINC01546A6NGU7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01546A6NGU7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms