Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM235A6NFC5 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TMEM235A6NFC5 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM235A6NFC5 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM235A6NFC5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM235A6NFC5 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM235A6NFC5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TMEM235A6NFC5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM235A6NFC5 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM235A6NFC5 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM235A6NFC5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM235A6NFC5 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM235A6NFC5 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM235A6NFC5 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM235A6NFC5 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM235A6NFC5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM235A6NFC5 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.65□□□□□ -0.23
TMEM235A6NFC5 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.64□□□□□ -0.23
TMEM235A6NFC5 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 AC139749.1-202ENST00000617529 3139 ntBASIC13.64□□□□□ -0.23
TMEM235A6NFC5 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM235A6NFC5 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 AKR1C7P-201ENST00000305623 895 ntBASIC13.63□□□□□ -0.23
TMEM235A6NFC5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 SAPCD2P3-201ENST00000455031 850 ntBASIC13.63□□□□□ -0.23
TMEM235A6NFC5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.63□□□□□ -0.23
TMEM235A6NFC5 AL031432.2-201ENST00000566714 459 ntBASIC13.63□□□□□ -0.23
TMEM235A6NFC5 AL928711.1-201ENST00000570165 459 ntBASIC13.63□□□□□ -0.23
TMEM235A6NFC5 MIR3652-201ENST00000579335 131 ntBASIC13.63□□□□□ -0.23
TMEM235A6NFC5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms