Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 AC004870.1-201ENST00000315132 882 ntBASIC16.92■□□□□ 0.3
RCCD1A6NED2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RCCD1A6NED2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RCCD1A6NED2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 SSR1P1-201ENST00000407630 814 ntBASIC16.92■□□□□ 0.3
RCCD1A6NED2 AC012497.1-201ENST00000429392 575 ntBASIC16.92■□□□□ 0.3
RCCD1A6NED2 AC007967.2-201ENST00000432613 625 ntBASIC16.92■□□□□ 0.3
RCCD1A6NED2 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.92■□□□□ 0.3
RCCD1A6NED2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.92■□□□□ 0.3
RCCD1A6NED2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.92■□□□□ 0.3
RCCD1A6NED2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.92■□□□□ 0.3
RCCD1A6NED2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.92■□□□□ 0.3
RCCD1A6NED2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.92■□□□□ 0.3
RCCD1A6NED2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RCCD1A6NED2 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.92■□□□□ 0.3
RCCD1A6NED2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
RCCD1A6NED2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.92■□□□□ 0.3
RCCD1A6NED2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RCCD1A6NED2 AC232323.1-201ENST00000540724 2099 ntBASIC16.92■□□□□ 0.3
RCCD1A6NED2 REXO1L5P-201ENST00000622260 2098 ntBASIC16.92■□□□□ 0.3
RCCD1A6NED2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RCCD1A6NED2 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RCCD1A6NED2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RCCD1A6NED2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RCCD1A6NED2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RCCD1A6NED2 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RCCD1A6NED2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RCCD1A6NED2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RCCD1A6NED2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RCCD1A6NED2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RCCD1A6NED2 AC104109.2-201ENST00000602919 1418 ntBASIC16.91■□□□□ 0.3
RCCD1A6NED2 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RCCD1A6NED2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RCCD1A6NED2 AC004987.2-201ENST00000395959 1148 ntBASIC16.91■□□□□ 0.3
RCCD1A6NED2 AC142381.1-201ENST00000426099 345 ntBASIC16.91■□□□□ 0.3
RCCD1A6NED2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RCCD1A6NED2 FAAHP1-202ENST00000446499 1238 ntBASIC16.91■□□□□ 0.3
RCCD1A6NED2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RCCD1A6NED2 AC074386.1-202ENST00000463561 864 ntBASIC16.91■□□□□ 0.3
RCCD1A6NED2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RCCD1A6NED2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 AC097359.3-201ENST00000603982 1210 ntBASIC16.91■□□□□ 0.3
RCCD1A6NED2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.91■□□□□ 0.3
RCCD1A6NED2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RCCD1A6NED2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RCCD1A6NED2 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RCCD1A6NED2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.91■□□□□ 0.3
RCCD1A6NED2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RCCD1A6NED2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RCCD1A6NED2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 AC005089.1-201ENST00000619486 2241 ntBASIC16.9■□□□□ 0.3
RCCD1A6NED2 AC005912.2-201ENST00000619492 2400 ntBASIC16.9■□□□□ 0.3
RCCD1A6NED2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RCCD1A6NED2 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RCCD1A6NED2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RCCD1A6NED2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RCCD1A6NED2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RCCD1A6NED2 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RCCD1A6NED2 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RCCD1A6NED2 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 AL359258.3-201ENST00000622910 2331 ntBASIC16.9■□□□□ 0.3
RCCD1A6NED2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RCCD1A6NED2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms