Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 SCARNA2-201ENST00000458748 420 ntBASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 AC021087.4-201ENST00000563761 564 ntBASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 AC008608.2-201ENST00000606089 416 ntBASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 AL078644.1-201ENST00000609881 752 ntBASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 MRPL20P1-201ENST00000400819 433 ntBASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 AC243562.2-201ENST00000561247 970 ntBASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 AC136759.1-202ENST00000530858 2194 ntBASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 AL691432.1-201ENST00000596308 1422 ntBASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.89□□□□□ -0.03
TCRBV3S1A0A5B6 AC117489.1-201ENST00000625169 3217 ntBASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms