Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CYP46A1Q9Y6A2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CYP46A1Q9Y6A2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.89■□□□□ 0.62
CYP46A1Q9Y6A2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 AC010327.4-202ENST00000591484 748 ntBASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP46A1Q9Y6A2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 AL353705.2-201ENST00000428243 662 ntBASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 AC018529.1-201ENST00000613063 361 ntBASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 AC009090.5-201ENST00000624886 2285 ntBASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.88■□□□□ 0.61
CYP46A1Q9Y6A2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 NFIC-211ENST00000641145 8399 ntBASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 RPSAP43-201ENST00000402237 625 ntBASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 AP000344.2-201ENST00000512987 629 ntBASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CYP46A1Q9Y6A2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms