Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHB7Q9Y5E2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHB7Q9Y5E2 AC000095.1-201ENST00000603208 874 ntBASIC17.03■□□□□ 0.32
PCDHB7Q9Y5E2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHB7Q9Y5E2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PCDHB7Q9Y5E2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB7Q9Y5E2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB7Q9Y5E2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
PCDHB7Q9Y5E2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB7Q9Y5E2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB7Q9Y5E2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHB7Q9Y5E2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB7Q9Y5E2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB7Q9Y5E2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.03■□□□□ 0.32
PCDHB7Q9Y5E2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 TUBB1P2-201ENST00000422712 1306 ntBASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 TUBB1P1-201ENST00000503144 1300 ntBASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 AC006449.6-201ENST00000612330 2296 ntBASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 MIR1908-201ENST00000410394 80 ntBASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 AP000812.2-201ENST00000538934 718 ntBASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHB7Q9Y5E2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB7Q9Y5E2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB7Q9Y5E2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB7Q9Y5E2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB7Q9Y5E2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB7Q9Y5E2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB7Q9Y5E2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.02■□□□□ 0.31
PCDHB7Q9Y5E2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB7Q9Y5E2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
PCDHB7Q9Y5E2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 AL355994.2-201ENST00000447882 704 ntBASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 AC005252.2-201ENST00000624630 1141 ntBASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB7Q9Y5E2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms