Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.26□□□□□ -0.13
COPS3Q9UNS2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 AC140658.5-201ENST00000438532 169 ntBASIC14.26□□□□□ -0.13
COPS3Q9UNS2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 RN7SL510P-201ENST00000581311 263 ntBASIC14.26□□□□□ -0.13
COPS3Q9UNS2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 AC104692.2-201ENST00000603054 253 ntBASIC14.26□□□□□ -0.13
COPS3Q9UNS2 AC023141.13-201ENST00000604991 943 ntBASIC14.26□□□□□ -0.13
COPS3Q9UNS2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
COPS3Q9UNS2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 AL161772.1-201ENST00000610494 4412 ntBASIC14.25□□□□□ -0.13
COPS3Q9UNS2 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 PMS2P7-201ENST00000506558 1336 ntBASIC14.25□□□□□ -0.13
COPS3Q9UNS2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 MRPL3P1-201ENST00000400109 1033 ntBASIC14.25□□□□□ -0.13
COPS3Q9UNS2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 IGHV3-22-201ENST00000520721 359 ntBASIC14.25□□□□□ -0.13
COPS3Q9UNS2 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 AC007064.4-201ENST00000637740 555 ntBASIC14.25□□□□□ -0.13
COPS3Q9UNS2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms