Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
SHROOM4Q9ULL8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC29.9■■■□□ 2.38
SHROOM4Q9ULL8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC29.9■■■□□ 2.38
SHROOM4Q9ULL8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
SHROOM4Q9ULL8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
SHROOM4Q9ULL8 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
SHROOM4Q9ULL8 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
SHROOM4Q9ULL8 GGCT-203ENST00000409144 836 ntTSL 2 BASIC29.9■■■□□ 2.38
SHROOM4Q9ULL8 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC29.9■■■□□ 2.38
SHROOM4Q9ULL8 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
SHROOM4Q9ULL8 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC29.9■■■□□ 2.38
SHROOM4Q9ULL8 PFN2-215ENST00000497148 743 ntTSL 4 BASIC29.9■■■□□ 2.38
SHROOM4Q9ULL8 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
SHROOM4Q9ULL8 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC29.9■■■□□ 2.38
SHROOM4Q9ULL8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC29.9■■■□□ 2.38
SHROOM4Q9ULL8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
SHROOM4Q9ULL8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 CSH2-202ENST00000345366 598 ntTSL 5 BASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 AC134915.1-201ENST00000426461 574 ntBASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 LDHBP1-201ENST00000455730 1119 ntBASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 RPL8-205ENST00000527914 551 ntTSL 3 BASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 AP001063.1-201ENST00000568332 529 ntBASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 AC244452.3-201ENST00000636814 210 ntBASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
SHROOM4Q9ULL8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
SHROOM4Q9ULL8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC29.89■■■□□ 2.37
SHROOM4Q9ULL8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC29.89■■■□□ 2.37
SHROOM4Q9ULL8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
SHROOM4Q9ULL8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC29.89■■■□□ 2.37
SHROOM4Q9ULL8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC29.89■■■□□ 2.37
SHROOM4Q9ULL8 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC29.88■■■□□ 2.37
SHROOM4Q9ULL8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
SHROOM4Q9ULL8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC29.88■■■□□ 2.37
SHROOM4Q9ULL8 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
SHROOM4Q9ULL8 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
SHROOM4Q9ULL8 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC29.88■■■□□ 2.37
SHROOM4Q9ULL8 TOMM22P5-201ENST00000416399 439 ntBASIC29.88■■■□□ 2.37
SHROOM4Q9ULL8 REEP1-202ENST00000453231 940 ntTSL 2 BASIC29.88■■■□□ 2.37
SHROOM4Q9ULL8 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC29.88■■■□□ 2.37
SHROOM4Q9ULL8 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
SHROOM4Q9ULL8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
SHROOM4Q9ULL8 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
SHROOM4Q9ULL8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
SHROOM4Q9ULL8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
SHROOM4Q9ULL8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC29.88■■■□□ 2.37
SHROOM4Q9ULL8 LINC02199-201ENST00000506655 2702 ntBASIC29.88■■■□□ 2.37
SHROOM4Q9ULL8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
SHROOM4Q9ULL8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 BTBD6P1-201ENST00000412176 1267 ntBASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 ADM-202ENST00000524948 584 ntTSL 2 BASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 AC128714.1-201ENST00000637035 887 ntBASIC29.87■■■□□ 2.37
SHROOM4Q9ULL8 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SHROOM4Q9ULL8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SHROOM4Q9ULL8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC29.86■■■□□ 2.37
SHROOM4Q9ULL8 MSTO2P-201ENST00000314835 1709 ntBASIC29.86■■■□□ 2.37
SHROOM4Q9ULL8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC29.86■■■□□ 2.37
SHROOM4Q9ULL8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
SHROOM4Q9ULL8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC29.86■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms