Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF346Q9UL40 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF346Q9UL40 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.37□□□□□ -0.11
ZNF346Q9UL40 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.37□□□□□ -0.11
ZNF346Q9UL40 AC020658.6-201ENST00000623564 1870 ntBASIC14.37□□□□□ -0.11
ZNF346Q9UL40 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.37□□□□□ -0.11
ZNF346Q9UL40 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF346Q9UL40 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF346Q9UL40 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF346Q9UL40 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF346Q9UL40 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF346Q9UL40 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF346Q9UL40 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF346Q9UL40 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.37□□□□□ -0.11
ZNF346Q9UL40 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 AC004967.1-201ENST00000453589 447 ntBASIC14.36□□□□□ -0.11
ZNF346Q9UL40 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 AL691403.2-201ENST00000618460 490 ntBASIC14.36□□□□□ -0.11
ZNF346Q9UL40 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 AC063926.3-201ENST00000624734 5658 ntBASIC14.36□□□□□ -0.11
ZNF346Q9UL40 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.36□□□□□ -0.11
ZNF346Q9UL40 UXT-AS1-201ENST00000590504 1525 ntBASIC14.36□□□□□ -0.11
ZNF346Q9UL40 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ZNF346Q9UL40 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 AL592309.1-201ENST00000443127 649 ntBASIC14.35□□□□□ -0.11
ZNF346Q9UL40 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF346Q9UL40 YBX1P5-201ENST00000509441 847 ntBASIC14.35□□□□□ -0.11
ZNF346Q9UL40 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms