Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 AC099521.3-201ENST00000624251 2938 ntBASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
UBQLN2Q9UHD9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 TSSC2-201ENST00000450217 709 ntBASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 KRT8P26-201ENST00000534154 1276 ntBASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 AL390719.2-201ENST00000606993 987 ntBASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 IGHV3-41-201ENST00000613121 348 ntBASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 AL353692.3-201ENST00000407031 1396 ntBASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 AC008677.1-201ENST00000519230 1561 ntBASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms