Protein–RNA interactions for Protein: Q9NXL2

ARHGEF38, Rho guanine nucleotide exchange factor 38, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF38Q9NXL2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF38Q9NXL2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF38Q9NXL2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF38Q9NXL2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF38Q9NXL2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF38Q9NXL2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF38Q9NXL2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.58■□□□□ 0.25
ARHGEF38Q9NXL2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF38Q9NXL2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF38Q9NXL2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF38Q9NXL2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF38Q9NXL2 AC010491.1-201ENST00000563101 2797 ntBASIC16.58■□□□□ 0.25
ARHGEF38Q9NXL2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ARHGEF38Q9NXL2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 AL365203.3-201ENST00000609742 2057 ntBASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARHGEF38Q9NXL2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 FLJ16779-201ENST00000612722 7638 ntBASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 AC087499.5-201ENST00000452760 1342 ntBASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 AZGP1P1-201ENST00000411909 902 ntBASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 TSSK5P-201ENST00000423978 907 ntBASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 AC241585.1-201ENST00000433527 519 ntBASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 SERBP1P3-201ENST00000459980 809 ntBASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 IGHV3-42-201ENST00000520410 361 ntBASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 AL033527.5-202ENST00000641632 1098 ntBASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.57■□□□□ 0.24
ARHGEF38Q9NXL2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms