Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.32■□□□□ 0.36
TRMT13Q9NUP7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.32■□□□□ 0.36
TRMT13Q9NUP7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.32■□□□□ 0.36
TRMT13Q9NUP7 AC107373.2-201ENST00000607735 490 ntBASIC17.32■□□□□ 0.36
TRMT13Q9NUP7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.32■□□□□ 0.36
TRMT13Q9NUP7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.32■□□□□ 0.36
TRMT13Q9NUP7 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.32■□□□□ 0.36
TRMT13Q9NUP7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRMT13Q9NUP7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRMT13Q9NUP7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
TRMT13Q9NUP7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRMT13Q9NUP7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRMT13Q9NUP7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRMT13Q9NUP7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRMT13Q9NUP7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRMT13Q9NUP7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.32■□□□□ 0.36
TRMT13Q9NUP7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.32■□□□□ 0.36
TRMT13Q9NUP7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRMT13Q9NUP7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 AC025279.2-201ENST00000569730 653 ntBASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRMT13Q9NUP7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 FAM197Y7-201ENST00000432892 766 ntBASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 AC093813.1-201ENST00000605066 256 ntBASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRMT13Q9NUP7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms