Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 Metazoa_SRP.125-201ENST00000618659 283 ntBASIC18.98■□□□□ 0.63
RTN4Q9NQC3 AL034417.3-201ENST00000641100 1043 ntBASIC18.98■□□□□ 0.63
RTN4Q9NQC3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 KRT8P10-201ENST00000450021 1447 ntBASIC18.98■□□□□ 0.63
RTN4Q9NQC3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 CXorf21-201ENST00000378962 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 STK25P1-201ENST00000585406 838 ntBASIC18.97■□□□□ 0.63
RTN4Q9NQC3 AC005336.2-201ENST00000593183 939 ntBASIC18.97■□□□□ 0.63
RTN4Q9NQC3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4Q9NQC3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 AK4P3-201ENST00000418260 669 ntBASIC18.96■□□□□ 0.63
RTN4Q9NQC3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 AC103564.2-201ENST00000432853 1299 ntBASIC18.96■□□□□ 0.63
RTN4Q9NQC3 GUSBP12-201ENST00000513727 720 ntBASIC18.96■□□□□ 0.63
RTN4Q9NQC3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 AC083849.1-201ENST00000615227 514 ntBASIC18.96■□□□□ 0.63
RTN4Q9NQC3 AC066615.1-201ENST00000640911 628 ntBASIC18.96■□□□□ 0.63
RTN4Q9NQC3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 FAIM2-205ENST00000550890 2094 ntTSL 2 BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC18.96■□□□□ 0.63
RTN4Q9NQC3 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 RFX5-215ENST00000452671 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms