Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 MIR658-201ENST00000385210 100 ntBASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 HIST3H2BA-201ENST00000436555 524 ntBASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 RRP7BP-205ENST00000566851 833 ntBASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.93■□□□□ 0.14
TM9SF3Q9HD45 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 WFDC1-204ENST00000613603 549 ntBASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 GGT3P-204ENST00000453783 1664 ntBASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.92■□□□□ 0.14
TM9SF3Q9HD45 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 RPS2P32-201ENST00000439199 892 ntBASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms