Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.83■□□□□ 0.28
CD248Q9HCU0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD248Q9HCU0 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CD248Q9HCU0 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CD248Q9HCU0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD248Q9HCU0 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CD248Q9HCU0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CD248Q9HCU0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD248Q9HCU0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD248Q9HCU0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD248Q9HCU0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD248Q9HCU0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD248Q9HCU0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD248Q9HCU0 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD248Q9HCU0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD248Q9HCU0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD248Q9HCU0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD248Q9HCU0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD248Q9HCU0 AC021097.1-201ENST00000607902 574 ntBASIC16.82■□□□□ 0.28
CD248Q9HCU0 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD248Q9HCU0 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD248Q9HCU0 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.82■□□□□ 0.28
CD248Q9HCU0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD248Q9HCU0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD248Q9HCU0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.82■□□□□ 0.28
CD248Q9HCU0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD248Q9HCU0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.81■□□□□ 0.28
CD248Q9HCU0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CD248Q9HCU0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CD248Q9HCU0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.81■□□□□ 0.28
CD248Q9HCU0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD248Q9HCU0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD248Q9HCU0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.81■□□□□ 0.28
CD248Q9HCU0 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CD248Q9HCU0 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD248Q9HCU0 AL021920.2-201ENST00000624828 1351 ntBASIC16.81■□□□□ 0.28
CD248Q9HCU0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD248Q9HCU0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.81■□□□□ 0.28
CD248Q9HCU0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD248Q9HCU0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD248Q9HCU0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CD248Q9HCU0 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD248Q9HCU0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.81■□□□□ 0.28
CD248Q9HCU0 AC015922.1-201ENST00000421102 1152 ntBASIC16.81■□□□□ 0.28
CD248Q9HCU0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.81■□□□□ 0.28
CD248Q9HCU0 FAM207CP-201ENST00000443486 507 ntBASIC16.81■□□□□ 0.28
CD248Q9HCU0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.81■□□□□ 0.28
CD248Q9HCU0 AC069120.2-201ENST00000524091 540 ntBASIC16.81■□□□□ 0.28
CD248Q9HCU0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CD248Q9HCU0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CD248Q9HCU0 MIR4453-201ENST00000584019 89 ntBASIC16.81■□□□□ 0.28
CD248Q9HCU0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.81■□□□□ 0.28
CD248Q9HCU0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CD248Q9HCU0 AF228730.6-201ENST00000641497 218 ntBASIC16.81■□□□□ 0.28
CD248Q9HCU0 AC084121.3-201ENST00000641716 218 ntBASIC16.81■□□□□ 0.28
CD248Q9HCU0 AC105233.6-201ENST00000642093 218 ntBASIC16.81■□□□□ 0.28
CD248Q9HCU0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CD248Q9HCU0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD248Q9HCU0 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD248Q9HCU0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
CD248Q9HCU0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD248Q9HCU0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CD248Q9HCU0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD248Q9HCU0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD248Q9HCU0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CD248Q9HCU0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.81■□□□□ 0.28
CD248Q9HCU0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.81■□□□□ 0.28
CD248Q9HCU0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms