Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 LINC02199-201ENST00000506655 2702 ntBASIC18.72■□□□□ 0.59
RNF41Q9H4P4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.72■□□□□ 0.59
RNF41Q9H4P4 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.72■□□□□ 0.59
RNF41Q9H4P4 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.72■□□□□ 0.59
RNF41Q9H4P4 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.72■□□□□ 0.59
RNF41Q9H4P4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.71■□□□□ 0.59
RNF41Q9H4P4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 AC104794.3-201ENST00000566840 1248 ntBASIC18.71■□□□□ 0.59
RNF41Q9H4P4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 SRD5A3P1-201ENST00000603021 949 ntBASIC18.71■□□□□ 0.59
RNF41Q9H4P4 LINC01115-203ENST00000606068 577 ntBASIC18.71■□□□□ 0.59
RNF41Q9H4P4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF41Q9H4P4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.58
RNF41Q9H4P4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.71■□□□□ 0.58
RNF41Q9H4P4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 AC015922.1-201ENST00000421102 1152 ntBASIC18.7■□□□□ 0.58
RNF41Q9H4P4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 SERBP1P5-201ENST00000510079 1181 ntBASIC18.7■□□□□ 0.58
RNF41Q9H4P4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 RN7SL204P-201ENST00000582831 262 ntBASIC18.7■□□□□ 0.58
RNF41Q9H4P4 LINC02560-201ENST00000596379 459 ntBASIC18.7■□□□□ 0.58
RNF41Q9H4P4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 AC008761.3-201ENST00000624803 892 ntBASIC18.7■□□□□ 0.58
RNF41Q9H4P4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms