Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 RNA5SP410-201ENST00000516285 106 ntBASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 AC104640.1-201ENST00000562617 2109 ntBASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CCDC68Q9H2F9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 HTR5BP-201ENST00000430851 1154 ntBASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 DNAJB3-201ENST00000446806 729 ntBASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC68Q9H2F9 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms