Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 MTDHP5-201ENST00000598980 586 ntBASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 AC068418.2-201ENST00000577309 3703 ntBASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 AC138035.3-201ENST00000622706 2791 ntBASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 UXT-AS1-201ENST00000590504 1525 ntBASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 AC211486.1-202ENST00000416371 468 ntBASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 AC211476.1-201ENST00000503899 468 ntBASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 IGHV3-62-201ENST00000520057 340 ntBASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 TNRC18P2-201ENST00000417666 2714 ntBASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UPF3BQ9BZI7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC19.02■□□□□ 0.63
UPF3BQ9BZI7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UPF3BQ9BZI7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
UPF3BQ9BZI7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.02■□□□□ 0.63
UPF3BQ9BZI7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
UPF3BQ9BZI7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UPF3BQ9BZI7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC19.02■□□□□ 0.63
UPF3BQ9BZI7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC19.02■□□□□ 0.63
UPF3BQ9BZI7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
UPF3BQ9BZI7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 AC087481.3-201ENST00000602886 1894 ntBASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 MIR4313-201ENST00000580760 101 ntBASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.01■□□□□ 0.63
UPF3BQ9BZI7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF3BQ9BZI7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF3BQ9BZI7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF3BQ9BZI7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF3BQ9BZI7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms