Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 AL391988.1-201ENST00000614747 1553 ntBASIC10.18□□□□□ -0.78
KRTAP3-3Q9BYR6 KDELC1P1-201ENST00000512118 1509 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 FAM92A1P2-201ENST00000502308 2455 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AC099778.1-201ENST00000568593 1911 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 RBFOX2-202ENST00000359369 1409 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 FP700111.2-201ENST00000619190 1892 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AP001347.1-201ENST00000428809 1332 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 ZSWIM1-201ENST00000372520 2168 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AL672167.1-206ENST00000356293 943 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 MIR16-2-201ENST00000362117 81 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AL451142.1-201ENST00000375867 775 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 SNORA19-201ENST00000384737 128 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 RN7SKP218-201ENST00000410222 292 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 RPL7P8-201ENST00000411964 730 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 HMGN1P37-201ENST00000413805 303 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 PPP1R12BP2-201ENST00000416956 639 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AC098592.1-201ENST00000419352 333 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 UPF3AP3-201ENST00000420996 769 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 HSD52-201ENST00000425914 1111 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AL596330.1-201ENST00000431691 837 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 TCEA1P3-201ENST00000443005 880 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 YWHAQP9-201ENST00000445891 512 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 DANT1-202ENST00000451869 444 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC01320-202ENST00000453774 1205 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AC021146.2-201ENST00000504736 556 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AC114812.4-201ENST00000506676 757 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AC021001.1-201ENST00000518703 987 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 HNF1A-AS1-202ENST00000535301 536 ntTSL 4 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AL355075.4-201ENST00000554988 638 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 DERL2-202ENST00000570848 657 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AP002478.2-201ENST00000584060 557 ntTSL 4 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 MIMT1-201ENST00000597105 1050 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AC055822.1-201ENST00000606067 445 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AC019193.2-201ENST00000610012 634 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC01632-202ENST00000617368 533 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 SRP54-AS1-205ENST00000636540 565 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms