Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SMOQ99835 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMOQ99835 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
SMOQ99835 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMOQ99835 PRAL-201ENST00000624952 3286 ntBASIC16.6■□□□□ 0.25
SMOQ99835 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMOQ99835 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.6■□□□□ 0.25
SMOQ99835 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMOQ99835 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SMOQ99835 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.6■□□□□ 0.25
SMOQ99835 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.6■□□□□ 0.25
SMOQ99835 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.6■□□□□ 0.25
SMOQ99835 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.6■□□□□ 0.25
SMOQ99835 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.6■□□□□ 0.25
SMOQ99835 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.6■□□□□ 0.25
SMOQ99835 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.6■□□□□ 0.25
SMOQ99835 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.6■□□□□ 0.25
SMOQ99835 AC008494.3-201ENST00000606615 944 ntBASIC16.6■□□□□ 0.25
SMOQ99835 AC007431.3-201ENST00000623221 587 ntBASIC16.6■□□□□ 0.25
SMOQ99835 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMOQ99835 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
SMOQ99835 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.6■□□□□ 0.25
SMOQ99835 AC138969.3-201ENST00000546612 1459 ntBASIC16.6■□□□□ 0.25
SMOQ99835 AC138932.2-201ENST00000548268 1459 ntBASIC16.6■□□□□ 0.25
SMOQ99835 AC126755.4-201ENST00000549796 1459 ntBASIC16.6■□□□□ 0.25
SMOQ99835 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.6■□□□□ 0.25
SMOQ99835 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMOQ99835 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMOQ99835 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SMOQ99835 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMOQ99835 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.6■□□□□ 0.25
SMOQ99835 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.59■□□□□ 0.25
SMOQ99835 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMOQ99835 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMOQ99835 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMOQ99835 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMOQ99835 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.59■□□□□ 0.25
SMOQ99835 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SMOQ99835 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SMOQ99835 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMOQ99835 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMOQ99835 DGCR5-201ENST00000399539 862 ntBASIC16.59■□□□□ 0.25
SMOQ99835 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.59■□□□□ 0.25
SMOQ99835 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SMOQ99835 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SMOQ99835 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMOQ99835 RN7SL399P-201ENST00000471648 279 ntBASIC16.59■□□□□ 0.25
SMOQ99835 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.59■□□□□ 0.25
SMOQ99835 AC123567.1-201ENST00000548294 1261 ntBASIC16.59■□□□□ 0.25
SMOQ99835 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.59■□□□□ 0.25
SMOQ99835 RRP7BP-205ENST00000566851 833 ntBASIC16.59■□□□□ 0.25
SMOQ99835 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.59■□□□□ 0.25
SMOQ99835 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMOQ99835 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
SMOQ99835 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
SMOQ99835 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMOQ99835 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SMOQ99835 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMOQ99835 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SMOQ99835 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SMOQ99835 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMOQ99835 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMOQ99835 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.59■□□□□ 0.25
SMOQ99835 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMOQ99835 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMOQ99835 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.58■□□□□ 0.25
SMOQ99835 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SMOQ99835 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
SMOQ99835 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMOQ99835 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMOQ99835 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.58■□□□□ 0.24
SMOQ99835 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.58■□□□□ 0.24
SMOQ99835 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.58■□□□□ 0.24
SMOQ99835 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.58■□□□□ 0.24
SMOQ99835 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMOQ99835 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMOQ99835 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMOQ99835 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.58■□□□□ 0.24
SMOQ99835 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMOQ99835 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.58■□□□□ 0.24
SMOQ99835 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.58■□□□□ 0.24
SMOQ99835 AC093726.1-201ENST00000608064 963 ntBASIC16.58■□□□□ 0.24
SMOQ99835 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMOQ99835 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMOQ99835 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMOQ99835 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMOQ99835 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMOQ99835 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SMOQ99835 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMOQ99835 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.58■□□□□ 0.24
SMOQ99835 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMOQ99835 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.58■□□□□ 0.24
SMOQ99835 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMOQ99835 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMOQ99835 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMOQ99835 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
SMOQ99835 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMOQ99835 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMOQ99835 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
SMOQ99835 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms