Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CCL19Q99731 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL19Q99731 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCL19Q99731 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL19Q99731 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL19Q99731 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CCL19Q99731 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 AC136604.1-201ENST00000418535 575 ntBASIC13.35□□□□□ -0.27
CCL19Q99731 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL19Q99731 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.35□□□□□ -0.27
CCL19Q99731 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.35□□□□□ -0.27
CCL19Q99731 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.35□□□□□ -0.27
CCL19Q99731 AC023310.1-201ENST00000554836 735 ntBASIC13.35□□□□□ -0.27
CCL19Q99731 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL19Q99731 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.35□□□□□ -0.27
CCL19Q99731 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.35□□□□□ -0.27
CCL19Q99731 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL19Q99731 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.35□□□□□ -0.27
CCL19Q99731 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.35□□□□□ -0.27
CCL19Q99731 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 MSTO2P-201ENST00000314835 1709 ntBASIC13.35□□□□□ -0.27
CCL19Q99731 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL19Q99731 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
CCL19Q99731 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
CCL19Q99731 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCL19Q99731 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL19Q99731 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
CCL19Q99731 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCL19Q99731 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 AP001094.4-201ENST00000579008 2176 ntBASIC13.35□□□□□ -0.27
CCL19Q99731 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CCL19Q99731 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL19Q99731 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CCL19Q99731 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL19Q99731 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
CCL19Q99731 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CCL19Q99731 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL19Q99731 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 AL121723.1-201ENST00000445194 1519 ntBASIC13.34□□□□□ -0.27
CCL19Q99731 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CCL19Q99731 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
CCL19Q99731 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CCL19Q99731 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL19Q99731 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
CCL19Q99731 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL19Q99731 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.34□□□□□ -0.27
CCL19Q99731 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL19Q99731 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CCL19Q99731 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.34□□□□□ -0.27
CCL19Q99731 RPL13AP20-201ENST00000459725 609 ntBASIC13.34□□□□□ -0.27
CCL19Q99731 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.34□□□□□ -0.27
CCL19Q99731 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CCL19Q99731 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.34□□□□□ -0.27
CCL19Q99731 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.34□□□□□ -0.27
CCL19Q99731 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.34□□□□□ -0.27
CCL19Q99731 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL19Q99731 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CCL19Q99731 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL19Q99731 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms