Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 AC005332.1-201ENST00000577698 1310 ntBASIC13.74□□□□□ -0.21
CMTM3Q96MX0 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 NUS1P2-201ENST00000417358 873 ntBASIC13.74□□□□□ -0.21
CMTM3Q96MX0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 DUX4L26-201ENST00000489078 1255 ntBASIC13.74□□□□□ -0.21
CMTM3Q96MX0 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 MIR4313-201ENST00000580760 101 ntBASIC13.74□□□□□ -0.21
CMTM3Q96MX0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 AC099336.1-202ENST00000602961 463 ntBASIC13.74□□□□□ -0.21
CMTM3Q96MX0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 AL589702.1-201ENST00000641229 1509 ntBASIC13.74□□□□□ -0.21
CMTM3Q96MX0 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.74□□□□□ -0.21
CMTM3Q96MX0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CMTM3Q96MX0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 CICP4-201ENST00000447359 2812 ntBASIC13.73□□□□□ -0.21
CMTM3Q96MX0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.73□□□□□ -0.21
CMTM3Q96MX0 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 RPS15P9-201ENST00000494093 319 ntBASIC13.73□□□□□ -0.21
CMTM3Q96MX0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 MTDHP4-201ENST00000600287 670 ntBASIC13.73□□□□□ -0.21
CMTM3Q96MX0 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CMTM3Q96MX0 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 ELK2BP-201ENST00000415014 1224 ntBASIC13.72□□□□□ -0.21
CMTM3Q96MX0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 FAM210CP-201ENST00000445714 574 ntBASIC13.72□□□□□ -0.21
CMTM3Q96MX0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 AC243562.2-201ENST00000561247 970 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms