Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC17Q96LX7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 USP32P1-208ENST00000506594 1164 ntBASIC18.42■□□□□ 0.54
CCDC17Q96LX7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 MIR5189-201ENST00000577370 114 ntBASIC18.42■□□□□ 0.54
CCDC17Q96LX7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 AC233724.13-201ENST00000598383 410 ntBASIC18.42■□□□□ 0.54
CCDC17Q96LX7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 AC112504.1-201ENST00000623415 1841 ntBASIC18.42■□□□□ 0.54
CCDC17Q96LX7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC17Q96LX7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 BOLA2P3-201ENST00000404566 256 ntBASIC18.41■□□□□ 0.54
CCDC17Q96LX7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 AC026410.3-201ENST00000514280 936 ntBASIC18.41■□□□□ 0.54
CCDC17Q96LX7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 SLC25A47P1-201ENST00000531577 414 ntBASIC18.41■□□□□ 0.54
CCDC17Q96LX7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 AL512343.1-201ENST00000605837 169 ntBASIC18.41■□□□□ 0.54
CCDC17Q96LX7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.41■□□□□ 0.54
CCDC17Q96LX7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC17Q96LX7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 DRD5P1-201ENST00000456605 1438 ntBASIC18.4■□□□□ 0.54
CCDC17Q96LX7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms