Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 MIR661-201ENST00000384842 89 ntBASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 AC093004.1-201ENST00000508850 424 ntBASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 AC190387.1-201ENST00000551683 408 ntBASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 AC092337.1-201ENST00000568699 1129 ntBASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 AC027307.3-201ENST00000594262 1100 ntBASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 AC004461.2-201ENST00000629517 803 ntBASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2E2Q96LR5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 DOC2GP-202ENST00000514950 1163 ntBASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 AC104794.3-201ENST00000566840 1248 ntBASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 SRD5A3P1-201ENST00000603021 949 ntBASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms