Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF1Q92994 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF1Q92994 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRF1Q92994 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF1Q92994 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRF1Q92994 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRF1Q92994 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.73■□□□□ 0.59
BRF1Q92994 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF1Q92994 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.73■□□□□ 0.59
BRF1Q92994 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.73■□□□□ 0.59
BRF1Q92994 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.73■□□□□ 0.59
BRF1Q92994 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRF1Q92994 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.73■□□□□ 0.59
BRF1Q92994 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.73■□□□□ 0.59
BRF1Q92994 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF1Q92994 AC069262.1-201ENST00000539058 672 ntBASIC18.73■□□□□ 0.59
BRF1Q92994 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
BRF1Q92994 HNRNPUP1-201ENST00000554987 333 ntBASIC18.73■□□□□ 0.59
BRF1Q92994 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
BRF1Q92994 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.73■□□□□ 0.59
BRF1Q92994 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.73■□□□□ 0.59
BRF1Q92994 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.73■□□□□ 0.59
BRF1Q92994 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRF1Q92994 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.73■□□□□ 0.59
BRF1Q92994 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.73■□□□□ 0.59
BRF1Q92994 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.73■□□□□ 0.59
BRF1Q92994 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.73■□□□□ 0.59
BRF1Q92994 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF1Q92994 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF1Q92994 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
BRF1Q92994 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF1Q92994 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.73■□□□□ 0.59
BRF1Q92994 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
BRF1Q92994 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF1Q92994 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.73■□□□□ 0.59
BRF1Q92994 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF1Q92994 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF1Q92994 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.72■□□□□ 0.59
BRF1Q92994 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF1Q92994 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.72■□□□□ 0.59
BRF1Q92994 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF1Q92994 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF1Q92994 AL035456.1-201ENST00000456064 1369 ntBASIC18.72■□□□□ 0.59
BRF1Q92994 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF1Q92994 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
BRF1Q92994 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.72■□□□□ 0.59
BRF1Q92994 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
BRF1Q92994 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
BRF1Q92994 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.72■□□□□ 0.59
BRF1Q92994 SPDYE17-201ENST00000412399 783 ntBASIC18.72■□□□□ 0.59
BRF1Q92994 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
BRF1Q92994 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.72■□□□□ 0.59
BRF1Q92994 HIST3H2BA-201ENST00000436555 524 ntBASIC18.72■□□□□ 0.59
BRF1Q92994 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.72■□□□□ 0.59
BRF1Q92994 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.72■□□□□ 0.59
BRF1Q92994 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.72■□□□□ 0.59
BRF1Q92994 AP001160.2-201ENST00000596071 487 ntBASIC18.72■□□□□ 0.59
BRF1Q92994 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.72■□□□□ 0.59
BRF1Q92994 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BRF1Q92994 AC079781.4-201ENST00000641908 219 ntBASIC18.72■□□□□ 0.59
BRF1Q92994 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF1Q92994 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.72■□□□□ 0.59
BRF1Q92994 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.72■□□□□ 0.59
BRF1Q92994 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.72■□□□□ 0.59
BRF1Q92994 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF1Q92994 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.72■□□□□ 0.59
BRF1Q92994 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF1Q92994 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.72■□□□□ 0.59
BRF1Q92994 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
BRF1Q92994 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
BRF1Q92994 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.72■□□□□ 0.59
BRF1Q92994 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.72■□□□□ 0.59
BRF1Q92994 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF1Q92994 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BRF1Q92994 TSPY26P-202ENST00000565928 3884 ntBASIC18.72■□□□□ 0.59
BRF1Q92994 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.71■□□□□ 0.59
BRF1Q92994 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.71■□□□□ 0.59
BRF1Q92994 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BRF1Q92994 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF1Q92994 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF1Q92994 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF1Q92994 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
BRF1Q92994 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
BRF1Q92994 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BRF1Q92994 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BRF1Q92994 AC090616.6-203ENST00000579186 1945 ntBASIC18.71■□□□□ 0.59
BRF1Q92994 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF1Q92994 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF1Q92994 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.71■□□□□ 0.59
BRF1Q92994 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF1Q92994 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF1Q92994 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.71■□□□□ 0.59
BRF1Q92994 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.71■□□□□ 0.59
BRF1Q92994 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.71■□□□□ 0.59
BRF1Q92994 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.71■□□□□ 0.59
BRF1Q92994 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.71■□□□□ 0.59
BRF1Q92994 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
BRF1Q92994 AC097359.3-201ENST00000603982 1210 ntBASIC18.71■□□□□ 0.59
BRF1Q92994 Z92544.3-201ENST00000624747 417 ntBASIC18.71■□□□□ 0.59
BRF1Q92994 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms