Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 RNF152P1-201ENST00000397754 604 ntBASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 AC096582.2-201ENST00000510860 516 ntBASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 AC027601.5-201ENST00000624065 2482 ntBASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L1Q8WWY6 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.52□□□□□ -0.4
MBD3L1Q8WWY6 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
MBD3L1Q8WWY6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
MBD3L1Q8WWY6 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
MBD3L1Q8WWY6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.52□□□□□ -0.4
MBD3L1Q8WWY6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
MBD3L1Q8WWY6 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
MBD3L1Q8WWY6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
MBD3L1Q8WWY6 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
MBD3L1Q8WWY6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
MBD3L1Q8WWY6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
MBD3L1Q8WWY6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
MBD3L1Q8WWY6 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
MBD3L1Q8WWY6 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
MBD3L1Q8WWY6 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
MBD3L1Q8WWY6 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
MBD3L1Q8WWY6 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 MINOS1P3-201ENST00000457048 203 ntBASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 AC015656.1-201ENST00000624209 3578 ntBASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.52□□□□□ -0.41
MBD3L1Q8WWY6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms