Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
U2AF1L4Q8WU68 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 AC006538.1-201ENST00000567905 1585 ntBASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 RN7SL399P-201ENST00000471648 279 ntBASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 AL589702.1-201ENST00000641229 1509 ntBASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2AF1L4Q8WU68 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 AC093724.1-201ENST00000448659 1027 ntBASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 AP002490.2-201ENST00000524791 560 ntBASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 C2orf69P2-201ENST00000562032 1123 ntBASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 AC133539.2-201ENST00000604757 467 ntBASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2AF1L4Q8WU68 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 AL442647.2-201ENST00000429864 857 ntBASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 AL139010.1-201ENST00000454878 894 ntBASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 KRT8P13-201ENST00000463294 1010 ntBASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 AP000812.2-201ENST00000538934 718 ntBASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 AC010328.2-201ENST00000597698 1111 ntBASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms