Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 TMEM261P1-201ENST00000604899 340 ntBASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 DBET-201ENST00000630918 3363 ntBASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 AL513523.2-202ENST00000427283 2040 ntBASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 TMEM14DP-201ENST00000422205 345 ntBASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 AC245100.5-201ENST00000452108 331 ntBASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 KRT17P8-201ENST00000540749 863 ntBASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 AC243562.2-201ENST00000561247 970 ntBASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 AC106886.1-201ENST00000568660 600 ntBASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 KRT8P37-201ENST00000451609 1420 ntBASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 AC022188.1-201ENST00000620960 1664 ntBASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.69■□□□□ 0.26
SHKBP1Q8TBC3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 CDC14C-201ENST00000428251 1719 ntBASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms