Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 PRYP6-201ENST00000514804 343 ntBASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 AC116407.3-201ENST00000623905 1129 ntBASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS1Q8NFJ9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 AL031284.1-201ENST00000419297 478 ntBASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 AC140658.5-201ENST00000438532 169 ntBASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 RNA5SP415-201ENST00000517246 115 ntBASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 AC023141.13-201ENST00000604991 943 ntBASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 AL773604.1-201ENST00000617417 272 ntBASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS1Q8NFJ9 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 SNX18-202ENST00000343017 3140 ntBASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.36□□□□□ -0.11
BBS1Q8NFJ9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms