Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 UGT1A2P-201ENST00000454886 866 ntBASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 LINC01115-203ENST00000606068 577 ntBASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 AC074044.1-201ENST00000609673 707 ntBASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 AC004461.2-201ENST00000629517 803 ntBASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 AC004840.1-201ENST00000636359 365 ntBASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 AF228730.6-201ENST00000641497 218 ntBASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 AC084121.3-201ENST00000641716 218 ntBASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 BTBD7P1-201ENST00000447253 1453 ntBASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 AL162727.3-201ENST00000635661 2787 ntBASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 KRT18P64-201ENST00000434946 1219 ntBASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 INGX-202ENST00000489074 768 ntBASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 AC105917.1-201ENST00000506637 2539 ntBASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC4Q8N9L1 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZIC4Q8N9L1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZIC4Q8N9L1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ZIC4Q8N9L1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
ZIC4Q8N9L1 AC092850.2-201ENST00000623821 2697 ntBASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms